{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF12239","protein_label":"Uncharacterized protein YPL067C","reviewed":true,"short_name":"DUF3605","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf3605-pf12239.yaml","source_record_id":"Pfam:PF12239","source_record_label":"Protein of unknown function (DUF3605)","source_section":"canonical_examples","taxon_id":"NCBITaxon:559292","taxon_label":"Saccharomyces cerevisiae (strain ATCC 204508 / S288c)","uniprot_accession":"Q02754","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF12239","protein_label":"N-acetylglucosamine-induced protein 1","reviewed":true,"short_name":"DUF3605","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf3605-pf12239.yaml","source_record_id":"Pfam:PF12239","source_record_label":"Protein of unknown function (DUF3605)","source_section":"canonical_examples","taxon_id":"NCBITaxon:237561","taxon_label":"Candida albicans (strain SC5314 / ATCC MYA-2876)","uniprot_accession":"Q59VM7","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF12239","protein_label":"","reviewed":null,"short_name":"DUF3605","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf3605-pf12239.yaml","source_record_id":"Pfam:PF12239","source_record_label":"Protein of unknown function (DUF3605)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":2135,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":2,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":1},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This family of proteins is found in eukaryotes and viruses. Proteins in this family are typically between 161 and 256 amino acids in length.","domain_architectures":37,"interpro_id":"IPR022036","known_evidence_count":null,"matches":2782,"name":"Protein of unknown function (DUF3605)","partial_evidence_count":null,"pfam_id":"PF12239","proteins":2570,"proteomes":1491,"short_name":"DUF3605","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF12239","structures":1,"taxa":3249,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF12239.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":2135,"domain_architectures":37,"matches":2782,"proteins":2570,"proteomes":1491,"structures":1,"taxa":3249},"curation_status":"SEEDED","description":"This family of proteins is found in eukaryotes and viruses. Proteins in this family are typically between 161 and 256 amino acids in length.","id":"Pfam:PF12239","interpro_id":"InterPro:IPR022036","name":"Protein of unknown function (DUF3605)","pfam_id":"PF12239","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF3605","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF12239"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF12239.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"1c086a0a716f3ce0b87fd12a6e8e6e77e863ec76e7d882ace5d51876d08ea1c7"}},"protein_examples":{"candidate_count":2,"discovery_scanned":true,"example_count":2,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Saccharomyces cerevisiae (strain ATCC 204508 / S288c)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf3605-pf12239.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF12239","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf3605-pf12239.yaml"}],"pfam_ids":["PF12239"],"protein_name":"Uncharacterized protein YPL067C","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MQQDIVNDHQEEAQGWKWEQIKEIIESGELARLKRSRQMTDKYHEHKKRTAGLDMNQYVLQKLGWSLDEPQLENAAAKAFSSSTLYAVRANDFPYNFEPGVVHLVLWSKVALPVHSPDKAVREAARARMNAFLQAQPLLRPLLSSGHVAWFVNYPELQSVARIFHAHVLLFFPRERYSAEQVKTTVDDILSHGFEPLA","sequence_length":198,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"d0fca99c180c0d63c63ae0eef260a72e4308598892689383c6000e0aab7cc013","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q02754.json","taxon_id":"559292","uniprot_accession":"Q02754","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Candida albicans (strain SC5314 / ATCC MYA-2876)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf3605-pf12239.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF12239","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf3605-pf12239.yaml"}],"pfam_ids":["PF12239"],"protein_name":"N-acetylglucosamine-induced protein 1","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MNPATIITNFNNSQLQTPPTSPVSFDKYYTYYNIQLEQSTLMPQPSKIKNGDPFTWSDIQFIIKSNQLEIFARSRQQTIKYHKFKQWLKDNKLSINDYLLDYELHWKESELREQQHELVSDKEYSIDYPEDLIFHNPNDISILYNKFPYYFEPNVKHICIWSKLKIPVDKNSEVGDISVMTKKLINRYLEKTFVAKGISWDQIVWFKNWLSLQSVRSISHIHVILKDVDDKFVDELISGGSGEVLTLDDYRNLE","sequence_length":254,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"1ddafffb9139c278aab0e8822c09dde29ab6fc81bcae00585aa5351c7298694b","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q59VM7.json","taxon_id":"237561","uniprot_accession":"Q59VM7","uniprot_release":"2026_03"}],"pfam_id":"PF12239","short_name":"DUF3605","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}