{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF14154","protein_label":"Uncharacterized protein YjdJ","reviewed":true,"short_name":"DUF4306","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf4306-pf14154.yaml","source_record_id":"Pfam:PF14154","source_record_label":"Domain of unknown function (DUF4306)","source_section":"canonical_examples","taxon_id":"NCBITaxon:224308","taxon_label":"Bacillus subtilis (strain 168)","uniprot_accession":"O31651","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF14154","protein_label":"","reviewed":null,"short_name":"DUF4306","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf4306-pf14154.yaml","source_record_id":"Pfam:PF14154","source_record_label":"Domain of unknown function (DUF4306)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":130,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function","domain_of_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":1,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":1},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This family includes the B. subtilis YjdJ protein [swissprot:O05524], which is functionally uncharacterised. This is not a homologue of E. coli YjdJ, which belongs to [pfam:PF00583]. This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 95 and 152 amino acids in length.","domain_architectures":2,"interpro_id":"IPR025440","known_evidence_count":null,"matches":249,"name":"Domain of unknown function (DUF4306)","partial_evidence_count":null,"pfam_id":"PF14154","proteins":242,"proteomes":213,"short_name":"DUF4306","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF14154","structures":0,"taxa":306,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF14154.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":130,"domain_architectures":2,"matches":249,"proteins":242,"proteomes":213,"structures":0,"taxa":306},"curation_status":"SEEDED","description":"This family includes the B. subtilis YjdJ protein [swissprot:O05524], which is functionally uncharacterised. This is not a homologue of E. coli YjdJ, which belongs to [pfam:PF00583]. This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 95 and 152 amino acids in length.","id":"Pfam:PF14154","interpro_id":"InterPro:IPR025440","name":"Domain of unknown function (DUF4306)","pfam_id":"PF14154","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF4306","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF14154"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF14154.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"60db8457d0c6bd1089a6d0dd701fba0cf0114665297e341c75de06f99452856b"}},"protein_examples":{"candidate_count":1,"discovery_scanned":true,"example_count":1,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Bacillus subtilis (strain 168)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf4306-pf14154.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF14154","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf4306-pf14154.yaml"}],"pfam_ids":["PF14154"],"protein_name":"Uncharacterized protein YjdJ","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MKGIFLVVQLGFSIMVFLFLAAVNWYQGSELVSDRFDWNYTAKLSKLLNGIDAVSSPKQISQLDFFIYSAKHYPVMSALMIISFLYVLAALFLLIYSVKCNKQEIHLDC","sequence_length":109,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"eb464203d8be5166bca1c192c506fd009ebbb4339199aedc7980b671e89d398b","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/O31651.json","taxon_id":"224308","uniprot_accession":"O31651","uniprot_release":"2026_03"}],"pfam_id":"PF14154","short_name":"DUF4306","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
