{"cross_mech":[],"family":{"alphafold_models":395,"candidate_reasons":["pfam_previous_unknown_name"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":0,"protein_traits_record":false,"records_by_mech":{},"scanned":false},"curation_status":"SEEDED","demotion_reasons":[],"description":"T6SSs are toxin delivery systems. It is a multiprotein complex requiring numerous core proteins (Tss proteins) including cytoplasmic, transmembrane, and outer membrane components. The needle or tube apparatus is comprised of a phage-like complex, similar to the T4 contractile bacteriophage tail, which is thought to be anchored to the membrane by a trans-envelope complex [[cite:PUB00090998]]. TssO proteins have one predicted TM region near their N-termini. In Flavobacterium johnsoniae, three specific components (TssN, TssO and TssP) are absent in the other sub-types of T6SS [[cite:PUB00090999]].","domain_architectures":1,"interpro_id":"IPR039449","known_evidence_count":null,"matches":597,"name":"Type VI secretion system, TssO","partial_evidence_count":null,"pfam_id":"PF17561","proteins":597,"proteomes":417,"short_name":"TssO","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF17561","structures":0,"taxa":568,"unknown_status":"EX_DUF"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF17561.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":395,"domain_architectures":1,"matches":597,"proteins":597,"proteomes":417,"structures":0,"taxa":568},"curation_status":"SEEDED","description":"T6SSs are toxin delivery systems. It is a multiprotein complex requiring numerous core proteins (Tss proteins) including cytoplasmic, transmembrane, and outer membrane components. The needle or tube apparatus is comprised of a phage-like complex, similar to the T4 contractile bacteriophage tail, which is thought to be anchored to the membrane by a trans-envelope complex [[cite:PUB00090998]]. TssO proteins have one predicted TM region near their N-termini. In Flavobacterium johnsoniae, three specific components (TssN, TssO and TssP) are absent in the other sub-types of T6SS [[cite:PUB00090999]].","id":"Pfam:PF17561","interpro_id":"InterPro:IPR039449","name":"Type VI secretion system, TssO","pfam_id":"PF17561","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"EX_DUF","short_name":"TssO","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF17561"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF17561.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"6f1388a9467aaf89019db503f9b33295ec6667a8ad72f512e474cae3ee496357"}},"protein_examples":{"candidate_count":0,"discovery_scanned":true,"example_count":0,"examples":[],"pfam_id":"PF17561","short_name":"TssO","status":"NO_SIBLING_CANDIDATE","unresolved":[]}}
