{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF17826","protein_label":"Uncharacterized protein C8orf76 homolog","reviewed":true,"short_name":"DUF5588","source_category":"sequence/repeat/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/repeat/pfam/duf5588-pf17826.yaml","source_record_id":"Pfam:PF17826","source_record_label":"Family of unknown function (DUF5588)","source_section":"canonical_examples","taxon_id":"NCBITaxon:10116","taxon_label":"Rattus norvegicus","uniprot_accession":"Q5BK24","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF17826","protein_label":"Zinc fingers and homeoboxes protein 1, isoform 2","reviewed":true,"short_name":"DUF5588","source_category":"sequence/repeat/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/repeat/pfam/duf5588-pf17826.yaml","source_record_id":"Pfam:PF17826","source_record_label":"Family of unknown function (DUF5588)","source_section":"canonical_examples","taxon_id":"NCBITaxon:9606","taxon_label":"Homo sapiens","uniprot_accession":"Q96EF9","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF17826","protein_label":"Uncharacterized protein C8orf76","reviewed":true,"short_name":"DUF5588","source_category":"sequence/repeat/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/repeat/pfam/duf5588-pf17826.yaml","source_record_id":"Pfam:PF17826","source_record_label":"Family of unknown function (DUF5588)","source_section":"canonical_examples","taxon_id":"NCBITaxon:9606","taxon_label":"Homo sapiens","uniprot_accession":"Q96K31","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF17826","protein_label":"","reviewed":null,"short_name":"DUF5588","source_category":"sequence/repeat/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/repeat/pfam/duf5588-pf17826.yaml","source_record_id":"Pfam:PF17826","source_record_label":"Family of unknown function (DUF5588)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":694,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function","description_says_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":3,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":1},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This is a family of unknown function found in chordata.","domain_architectures":10,"interpro_id":"IPR041404","known_evidence_count":null,"matches":1010,"name":"Family of unknown function (DUF5588)","partial_evidence_count":null,"pfam_id":"PF17826","proteins":814,"proteomes":562,"short_name":"DUF5588","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF17826","structures":0,"taxa":2022,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF17826.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":694,"domain_architectures":10,"matches":1010,"proteins":814,"proteomes":562,"structures":0,"taxa":2022},"curation_status":"SEEDED","description":"This is a family of unknown function found in chordata.","id":"Pfam:PF17826","interpro_id":"InterPro:IPR041404","name":"Family of unknown function (DUF5588)","pfam_id":"PF17826","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF5588","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF17826"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF17826.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"206b8ed9ec423d271574e8b85da8bb37af55b38b81eae9d3b881ed912a8f6d43"}},"protein_examples":{"candidate_count":3,"discovery_scanned":true,"example_count":3,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Rattus norvegicus","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/repeat/pfam/duf5588-pf17826.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF17826","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/repeat/pfam/duf5588-pf17826.yaml"}],"pfam_ids":["PF17826"],"protein_name":"Uncharacterized protein C8orf76 homolog","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"METGCWVLGGEFEDSVFEQKPERQPEPPSSYGAKLCEPQWFYEETESSNDIEVLTLKKFRGDLAYRRQEYEKALQEYSSISKQLPSTNFAMKRDVQEGQARCLAHLGRHEEALEIAVDLESKATNTEHLTSALSLHLAIFSRRQSLEKTILYLQKLISLHPLNPWSWCKLAEAYLSPGPDLPALGESPQGQKSSASSDKAVRASSVHSGTGCLPFPAPSPDSAVFSVEASGCDTQQDMQNCLAARRAAAQTEAQRKACAALIRARLLLQLAQSQQTSFALEKNLRTQQEIAQKVKEFSFREDTLLLMEEAMGEDIVPERIKEELHPEVQCVGPAALTASVAASSKEFEDKWFRKVRDHFSPLEKQSHVDIQIMA","sequence_length":374,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"4ed5ac3c18372c5441f06dbdafae4253c484e2cecd29d32521ada877edf276a8","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q5BK24.json","taxon_id":"10116","uniprot_accession":"Q5BK24","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Homo sapiens","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/repeat/pfam/duf5588-pf17826.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF17826","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/repeat/pfam/duf5588-pf17826.yaml"}],"pfam_ids":["PF17826"],"protein_name":"Zinc fingers and homeoboxes protein 1, isoform 2","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MLRKLWQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEALEIAANLENKATNTDHLTTVLYLQLAICSSLQNLEKTIFCLQKLISLHPFNPWNWGKLAEAYLNLGPALSAALASSQKQHSFTSSDKTIKSFFPHSGKDCLLCFPETLPESSLFSVEANSSNSQKNEKALTNIQNCMAEKRETVLIETQLKACASFIRTRLLLQFTQPQQTSFALERNLRTQQEIEDKMKGFSFKEDTLLLIAEVSVSLGFM","sequence_length":292,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"3931fd092e1113bc350f912167ec883f0bae3efd39d588a6dcdc5585346dffa9","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q96EF9.json","taxon_id":"9606","uniprot_accession":"Q96EF9","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Homo sapiens","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/repeat/pfam/duf5588-pf17826.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF17826","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/repeat/pfam/duf5588-pf17826.yaml"}],"pfam_ids":["PF17826"],"protein_name":"Uncharacterized protein C8orf76","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MDSGCWLFGGEFEDSVFEERPERRSGPPASYCAKLCEPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEALEIAANLENKATNTDHLTTVLYLQLAICSSLQNLEKTIFCLQKLISLHPFNPWNWGKLAEAYLNLGPALSAALASSQKQHSFTSSDKTIKSFFPHSGKDCLLCFPETLPESSLFSVEANSSNSQKNEKALTNIQNCMAEKRETVLIETQLKACASFIRTRLLLQFTQPQQTSFALERNLRTQQEIEDKMKGFSFKEDTLLLIAEVMGEDIPEKIKDEVHPEVKCVGSVALTALVTVSSEEFEDKWFRKIKDHFCPFENQFHTEIQILA","sequence_length":380,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"b4e007e4ce6c1cb599dfc5e1643ff59e278fc62e1652bedeb77c39148bfab43e","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q96K31.json","taxon_id":"9606","uniprot_accession":"Q96K31","uniprot_release":"2026_03"}],"pfam_id":"PF17826","short_name":"DUF5588","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
