{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":false,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF18656","protein_label":"Peptostreptococcal albumin-binding protein","reviewed":true,"short_name":"DUF5633","source_category":"sequence/domain/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/pfam/ga-like-pf17573.yaml","source_record_id":"Pfam:PF17573","source_record_label":"GA-like domain","source_section":"canonical_examples","taxon_id":"NCBITaxon:1260","taxon_label":"Finegoldia magna","uniprot_accession":"Q51911","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF18656","protein_label":"","reviewed":null,"short_name":"DUF5633","source_category":"sequence/repeat/interpro","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/repeat/interpro/repeat-of-unknown-function-duf5633-ipr040912.yaml","source_record_id":"InterPro:IPR040912","source_record_label":"Repeat of unknown function DUF5633","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF18656","protein_label":"Peptostreptococcal albumin-binding protein","reviewed":true,"short_name":"DUF5633","source_category":"sequence/repeat/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/repeat/pfam/duf5633-pf18656.yaml","source_record_id":"Pfam:PF18656","source_record_label":"Family of unknown function (DUF5633)","source_section":"canonical_examples","taxon_id":"NCBITaxon:1260","taxon_label":"Finegoldia magna","uniprot_accession":"Q51911","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF18656","protein_label":"","reviewed":null,"short_name":"DUF5633","source_category":"sequence/repeat/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/repeat/pfam/duf5633-pf18656.yaml","source_record_id":"Pfam:PF18656","source_record_label":"Family of unknown function (DUF5633)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":28,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":1,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":2},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This entry represents a 40 residue repeat that is often found in tandem in a small set of bacterial cell surface proteins. The function of this region is not known.","domain_architectures":20,"interpro_id":"IPR040912","known_evidence_count":null,"matches":48,"name":"Family of unknown function (DUF5633)","partial_evidence_count":null,"pfam_id":"PF18656","proteins":35,"proteomes":19,"short_name":"DUF5633","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF18656","structures":0,"taxa":49,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF18656.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":28,"domain_architectures":20,"matches":48,"proteins":35,"proteomes":19,"structures":0,"taxa":49},"curation_status":"SEEDED","description":"This entry represents a 40 residue repeat that is often found in tandem in a small set of bacterial cell surface proteins. The function of this region is not known.","id":"Pfam:PF18656","interpro_id":"InterPro:IPR040912","name":"Family of unknown function (DUF5633)","pfam_id":"PF18656","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF5633","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF18656"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF18656.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"0f44fc8de9a705e9a6e040b14b43d0334c44edc7cce2dffc03422abc5863b744"}},"protein_examples":{"candidate_count":1,"discovery_scanned":true,"example_count":1,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Finegoldia magna","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/ga-like-pf17573.yaml","qualification_status":"NOT_ASSESSED","record_id":"Pfam:PF17573","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/ga-like-pf17573.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/repeat/pfam/duf5633-pf18656.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF18656","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/repeat/pfam/duf5633-pf18656.yaml"}],"pfam_ids":["PF00746","PF17573","PF18656"],"protein_name":"Peptostreptococcal albumin-binding protein","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MKLNKKLLMAALAGAIVVGGGVNTFAADEPGAIKVDKAPEAPSQELKLTKEEAEKALKKEKPIAKERLRRLGITSEFILNQIDKATSREGLESLVQTIKQSYLKDHPIKEEKTEETPKYNNLFDKHELGGLGKDKGPGRFDENGWENNEHGYETRENAEKAAVKALGDKEINKSYTISQGVDGRYYYVLSREEAETPKKPEEKKPEDKRPKMTIDQWLLKNAKEDAIAELKKAGITSDFYFNAINKAKTVEEVNALKNEILKAHAGKEVNPSTPEVTPSVPQNHYHENDYANIGAGEGTKEDGKKENSKEGIKRKTAREEKPGKEEKPAKEDKKENKKKENTDSPNKKKKEKAALPEAGRRKAEILTLAAASLSSVAGAFISLKKRK","sequence_length":387,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"9f217cf993b0084191cf2352b807957ad921276d74b5b83e6110d937b0b00420","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q51911.json","taxon_id":"1260","uniprot_accession":"Q51911","uniprot_release":"2026_03"}],"pfam_id":"PF18656","short_name":"DUF5633","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
