{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF19507","protein_label":"Oxidoreductase PigB","reviewed":true,"short_name":"DUF6041","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf6041-pf19507.yaml","source_record_id":"Pfam:PF19507","source_record_label":"Family of unknown function (DUF6041)","source_section":"canonical_examples","taxon_id":"NCBITaxon:104623","taxon_label":"Prodigiosinella confusarubida","uniprot_accession":"Q5W270","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF19507","protein_label":"","reviewed":null,"short_name":"DUF6041","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf6041-pf19507.yaml","source_record_id":"Pfam:PF19507","source_record_label":"Family of unknown function (DUF6041)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":24,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":1,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":1},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0000260) is described by MIBiG as an example of the following biosynthetic class, polyketide. This family includes a protein from the prodigiosin biosynthetic gene cluster from Hahella chejuensis KCTC 2396 [[cite:PUB00099442]]","domain_architectures":3,"interpro_id":"IPR046104","known_evidence_count":null,"matches":45,"name":"Family of unknown function (DUF6041)","partial_evidence_count":null,"pfam_id":"PF19507","proteins":45,"proteomes":43,"short_name":"DUF6041","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF19507","structures":0,"taxa":110,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF19507.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":24,"domain_architectures":3,"matches":45,"proteins":45,"proteomes":43,"structures":0,"taxa":110},"curation_status":"SEEDED","description":"This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0000260) is described by MIBiG as an example of the following biosynthetic class, polyketide. This family includes a protein from the prodigiosin biosynthetic gene cluster from Hahella chejuensis KCTC 2396 [[cite:PUB00099442]]","id":"Pfam:PF19507","interpro_id":"InterPro:IPR046104","name":"Family of unknown function (DUF6041)","pfam_id":"PF19507","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF6041","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF19507"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF19507.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"bded0085e3d9972f89ce6b19e5af61b5a14a497c1db84f122e4a39764657c00c"}},"protein_examples":{"candidate_count":1,"discovery_scanned":true,"example_count":1,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Prodigiosinella confusarubida","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf6041-pf19507.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF19507","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf6041-pf19507.yaml"}],"pfam_ids":["PF01593","PF19507"],"protein_name":"Oxidoreductase PigB","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MIIQRLFGILYMLAGLAKAFPQFENVPAVLRQAAIANQGTWYAAASIWLGAHGDVINILVGVVLFGSGVILMLNPLWTTLVIYAQLLMMAVFVVILHQSQPQVMLLDGVFALAALYMLRGQYHRKPKPRTFPTTSFSLPTPSSESSFSAPLGDEYDVVIIGGGASGLTAASEFTHERVLVLEKSSTFGGNARYHTFNRLKHPTAGVCFQEPFPGSNMLRLLKKIGLEGKYKSNEKDTLVFFDTFLLLKCLGEIVVGFIKQPRYLLKLSVWGLTSQLFLHAIIGKPYVVAAKQLGDPIFADLYTFLDKFSPRGDFYPRLPWTPNGSWSKAHMELLDNISLYTYLFEPDKLGRLPEQLRPPARLGKLVENAVSTTLRVECLDIHDVSAYVGLHFLVGYLRGNLVTLPGGNGSISAGLCKYLSHQRNVTLQNHVQLTAVEPQHNGTCIQFTINGQPRQVQAQQIIWAAPKTQLATWLPGLPAKQLAAIKNIRHEDYYLANVFLSKPVLGHSFGGYMIEPDSNKDPFSWCKAGTCLVANWMDDHADVDVGVLTLLKPTTRSERQDRTAQNAFLALQQQTYAEIAKVLRNIGIGAEVIEDIQIWYWPAGLVTSVVGQQAEGVFETARQSFENIHFANQDSVGVGNIESAILSGIDAANAVKAQLMDTENVVEVAG","sequence_length":670,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"cfa6397a3c4800adbf32cffa6523a2ac1b4684198c181a2c3a8c3d5160f72f7f","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q5W270.json","taxon_id":"104623","uniprot_accession":"Q5W270","uniprot_release":"2026_03"}],"pfam_id":"PF19507","short_name":"DUF6041","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
