{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF25899","protein_label":"Uncharacterized protein Y92H12BR.3","reviewed":true,"short_name":"DUF7959","source_category":"sequence/domain/interpro","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/interpro/domain-of-unknown-function-duf7959-ipr058265.yaml","source_record_id":"InterPro:IPR058265","source_record_label":"Domain of unknown function DUF7959","source_section":"canonical_examples","taxon_id":"NCBITaxon:6239","taxon_label":"Caenorhabditis elegans","uniprot_accession":"Q9BPN8","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF25899","protein_label":"","reviewed":null,"short_name":"DUF7959","source_category":"sequence/domain/interpro","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/interpro/domain-of-unknown-function-duf7959-ipr058265.yaml","source_record_id":"InterPro:IPR058265","source_record_label":"Domain of unknown function DUF7959","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":false,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF25899","protein_label":"Uncharacterized protein Y92H12BR.3","reviewed":true,"short_name":"DUF7959","source_category":"sequence/domain/interpro","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/interpro/lola-like-domain-1-ipr058830.yaml","source_record_id":"InterPro:IPR058830","source_record_label":"LolA-like domain 1","source_section":"canonical_examples","taxon_id":"NCBITaxon:6239","taxon_label":"Caenorhabditis elegans","uniprot_accession":"Q9BPN8","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":false,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF25899","protein_label":"Uncharacterized protein Y92H12BR.3","reviewed":true,"short_name":"DUF7959","source_category":"sequence/domain/interpro","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/interpro/lola-like-domain-2-ipr058831.yaml","source_record_id":"InterPro:IPR058831","source_record_label":"LolA-like domain 2","source_section":"canonical_examples","taxon_id":"NCBITaxon:6239","taxon_label":"Caenorhabditis elegans","uniprot_accession":"Q9BPN8","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF25899","protein_label":"Uncharacterized protein Y92H12BR.3","reviewed":true,"short_name":"DUF7959","source_category":"sequence/domain/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/pfam/duf7959-pf25899.yaml","source_record_id":"Pfam:PF25899","source_record_label":"Domain of unknown function (DUF7959)","source_section":"canonical_examples","taxon_id":"NCBITaxon:6239","taxon_label":"Caenorhabditis elegans","uniprot_accession":"Q9BPN8","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF25899","protein_label":"","reviewed":null,"short_name":"DUF7959","source_category":"sequence/domain/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/pfam/duf7959-pf25899.yaml","source_record_id":"Pfam:PF25899","source_record_label":"Domain of unknown function (DUF7959)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":false,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF25899","protein_label":"Uncharacterized protein Y92H12BR.3","reviewed":true,"short_name":"DUF7959","source_category":"sequence/domain/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/pfam/lola-1st-nematode-pf25897.yaml","source_record_id":"Pfam:PF25897","source_record_label":"Nematode 1st LolA-like domain","source_section":"canonical_examples","taxon_id":"NCBITaxon:6239","taxon_label":"Caenorhabditis elegans","uniprot_accession":"Q9BPN8","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":false,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF25899","protein_label":"Uncharacterized protein Y92H12BR.3","reviewed":true,"short_name":"DUF7959","source_category":"sequence/domain/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/pfam/lola-2nd-metazoa-pf25898.yaml","source_record_id":"Pfam:PF25898","source_record_label":"Metazoan 2nd LolA-like domain","source_section":"canonical_examples","taxon_id":"NCBITaxon:6239","taxon_label":"Caenorhabditis elegans","uniprot_accession":"Q9BPN8","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":330,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function","domain_of_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":1,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":6},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This entry represents a ferredoxin-like fold domain found at the C-terminus of a range of proteins that contain LolA-like domains suggesting these proteins may act as lipoprotein chaperones. The function of this domain is uncertain.","domain_architectures":22,"interpro_id":"IPR058265","known_evidence_count":null,"matches":368,"name":"Domain of unknown function (DUF7959)","partial_evidence_count":null,"pfam_id":"PF25899","proteins":362,"proteomes":175,"short_name":"DUF7959","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF25899","structures":0,"taxa":629,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF25899.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":330,"domain_architectures":22,"matches":368,"proteins":362,"proteomes":175,"structures":0,"taxa":629},"curation_status":"SEEDED","description":"This entry represents a ferredoxin-like fold domain found at the C-terminus of a range of proteins that contain LolA-like domains suggesting these proteins may act as lipoprotein chaperones. The function of this domain is uncertain.","id":"Pfam:PF25899","interpro_id":"InterPro:IPR058265","name":"Domain of unknown function (DUF7959)","pfam_id":"PF25899","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF7959","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF25899"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF25899.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"52e99cb97075f4c0e94b48bdab8a089a56de48c3fa80ea9f3be0569c312e885c"}},"protein_examples":{"candidate_count":1,"discovery_scanned":true,"example_count":1,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Caenorhabditis elegans","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/domain-of-unknown-function-duf7959-ipr058265.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR058265","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/domain-of-unknown-function-duf7959-ipr058265.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/lola-like-domain-1-ipr058830.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR058830","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/lola-like-domain-1-ipr058830.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/lola-like-domain-2-ipr058831.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR058831","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/lola-like-domain-2-ipr058831.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/duf7959-pf25899.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF25899","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/duf7959-pf25899.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/lola-1st-nematode-pf25897.yaml","qualification_status":"NOT_ASSESSED","record_id":"Pfam:PF25897","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/lola-1st-nematode-pf25897.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/lola-2nd-metazoa-pf25898.yaml","qualification_status":"NOT_ASSESSED","record_id":"Pfam:PF25898","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/lola-2nd-metazoa-pf25898.yaml"}],"pfam_ids":["PF25897","PF25898","PF25899"],"protein_name":"Uncharacterized protein Y92H12BR.3","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MKAQLAILSLLVGLLAAQDLRSLLDICANPPKTTPKTLSDKISLPESYKISGSMTDWMKASTSLLVESASKEFRVLEKQTRDQMPEKWIQELTGAKLTSFINVTSGECIGNVSKPDLFKISRFESIIGADTSSLYSIILGLIEFDKSHTGFFVEDHVEVVGGVNAQKWVTCIDGATANDTKVLLEVRYAGEETIRPAQSPFSNPLLLSIRLAELPNFNSTVALNHVSVELDRYELPVGNEAAVVHGVWCKNRNDTVLVLKPLDEYAAILNYFDPSTNRSDVVEVLYSKTKKVIHIAGDSFENGVKLFKATPKRYKNGTDYILHDFNYGYEFTMSHGACQSFSPLDDSSEDVLVKNGTDHFIMNNMEWLLVDPGLRFSLYESDVDMVGTAFKTYRAYDGRDETIVELHVTEDMEVHSMARFRMGSRHLAVSLTVQRIPMESSRLNMKTVQLSNCYDEQKFANNTLMVQIKDKTLSDLSQVGLNGLNEAVASSISKNVHPIIPYRVIVFYVESRDSGLEMIVRVAEKTEKKPGNVVGYNYTTELTTAEIFKLMNDSMTLDKMPIEVLKNNGVKEEWMADASTMKMYPPENDDGFIGYTGGAMFVLAIFCLLIGVSIGAVGVFVATRRQRISTLAYQVFE","sequence_length":637,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"4465746a77ea754c0ce2232804be2c2b3fc866c7b1a998e48227410316b22e5f","sequence_version":2,"source_url":"https://rest.uniprot.org/uniprotkb/Q9BPN8.json","taxon_id":"6239","uniprot_accession":"Q9BPN8","uniprot_release":"2026_03"}],"pfam_id":"PF25899","short_name":"DUF7959","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}