Ontology mapping
- Primary identifier
-
CHEBI:16808
Synonyms (2)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| 2-oxogluconate | RAW_TEXT | microbedecoder | |
| 2-Ketogluconate (2-dehydro-D-gluconate) | RAW_TEXT | sssom_other_backfill |
Chemical properties
- Molecular formula
- C6H9O7
- Smiles
- O=C([O-])C(=O)[C@@H](O)[C@H](O)[C@H](O)CO
- Inchi
- InChI=1S/C6H10O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-4,7-10H,1H2,(H,12,13)/p-1/t2-,3-,4+/m1/s1
- Molecular weight
- 193.131
- Data source
- ChEBI+PubChem
- Retrieval date
- 2026-08-13T04:17:00.883728+00:00
Evidence (1)
LEXICAL_MATCH
via microbedecoder
Imported from microbedecoder via ols-label-exact-chebi. source_id=kgmicrobe.trait:2_dehydro_d_gluconate;
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
- Source occurrences
- Source
- microbedecoder
- Count
- 152
- Source columns
- BacDive_Metabolite_production|BacDive_Metabolite_utilization
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-08-04T02:54:09.684805+00:00 | audit_import_ingredients[microbedecoder] | CREATED_FROM_INGREDIENT_IMPORT | MAPPED | Imported from microbedecoder via ols-label-exact-chebi. source_id=kgmicrobe.trait:2_dehydro_d_gluconate; |
| 2026-08-04T03:08:34.142678+00:00 | microbedecoder-import-review LLM | FLAGGED_FOR_REVIEW | mapping_status MAPPED -> PENDING_REVIEW | |
| 2026-08-04T00:00:00+00:00 | review-ingredients LLM | REVIEWED_AND_PROMOTED | MAPPED | mapping_status PENDING_REVIEW -> MAPPED |
| 2026-08-06T05:06:48.536349+00:00 | issue_213_grounding LLM | MERGED_FROM_UNMAPPED_DUPLICATE | Absorbed UNMAPPED_0661 '2-oxogluconate' as a RAW_TEXT synonym -- 2-oxogluconate is 2-dehydro-D-gluconate under oxo/dehydro naming; the anion form matches the label (#213). No new SSSOM row; CHEBI:16808 is already mapped. Source: kgmicrobe.trait:2_oxogluconate. | |
| 2026-08-13T00:00:00+00:00 | classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary with a structural definition) (#323) | |
| 2026-09-02T17:40:44.716277+00:00 | claude_sssom_surface_form_backfill | ADDED_SYNONYMS | Recovered 1 surface form(s) that the published SSSOM `other` carried but no curated record did, so a rebuild would have dropped them from KGX: '2-Ketogluconate (2-dehydro-D-gluconate)'. Tokens already present on the kg-microbe ontology node were left out as redundant (#520). |