Ontology mapping
- Primary identifier
-
CHEBI:58989 - Notes
- Imported from microbedecoder (source_id=kgmicrobe.compound:5_trimethoxybenzoate); no CAS-RN or CHEBI/NCIT match. Curator review needed.
Synonyms (2)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| 5-trimethoxybenzoate | RAW_TEXT | microbedecoder | |
| Trimethoxybenzoate | RAW_TEXT | microbedecoder |
Evidence (1)
DATABASE_MATCH
via MIM curation (#213)
SUPERSEDED (#308): the recorded CLOSE_MATCH rationale reads 'CLOSE_MATCH for the lost locants'. The locants are no longer lost, so the stated reason no longer holds and the grade is now a curator call. Original note follows. '5-trimethoxybenzoate' is a truncation: a trimethoxy benzoate needs three locants, and 3,4,5-trimethoxybenzoate is the compound. CLOSE_MATCH for the lost locants (#213).
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
- Source occurrences
- Source
- microbedecoder
- Count
- 1
- Source columns
- bergey:substrates
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-08-04T02:54:09.684805+00:00 | audit_import_ingredients[microbedecoder] | CREATED_AS_UNMAPPED | UNMAPPED | Imported from microbedecoder (source_id=kgmicrobe.compound:5_trimethoxybenzoate); no CAS-RN or CHEBI/NCIT match. Curator review needed. |
| 2026-08-06T00:00:00+00:00 | promote_resolved_unmapped | PROMOTED_TO_MAPPED | MAPPED | Promoted UNMAPPED_0737 -> CHEBI:58989 "3,4,5-trimethoxybenzoate" (CLOSE_MATCH); mapping_status UNMAPPED -> MAPPED, SSSOM row added. |
| 2026-08-06T08:22:35.126389+00:00 | issue_213_grounding LLM | MERGED_FROM_UNMAPPED_DUPLICATE | Absorbed UNMAPPED_0848 'Trimethoxybenzoate' as a RAW_TEXT synonym -- Same compound as the 5-trimethoxybenzoate record just promoted to CHEBI:58989; the bare label carries no locants at all (#213). No new SSSOM row; CHEBI:58989 is already mapped. Source: kgmicrobe.trait:trimethoxybenzoate. | |
| 2026-08-08T00:00:00+00:00 | apply_locant_corrections | CORRECTED_TRUNCATED_LABEL | preferred_term '5-trimethoxybenzoate' -> '3,4,5-trimethoxybenzoate'. The source label lost its locant list to a comma-splitting bug in the microbedecoder ingest (#308); '5-trimethoxybenzoate' is not a possible chemical name. The ontology mapping was already correct and is unchanged. Verified: OLS4 CHEBI:58989 label='3,4,5-trimethoxybenzoate', not obsolete. The corrected preferred_term now equals the ontology label exactly; mapping_quality is left at CLOSE_MATCH because re-grading is a separate curator call. | |
| 2026-08-13T00:00:00+00:00 | classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary with a structural definition) (#323) |