Ontology mapping
- Primary identifier
-
kgmicrobe.ingredient:84_gl_nahco3_solution - Ontology term
-
CHEBI:32139— sodium hydrogencarbonate - Ontology label
- sodium hydrogencarbonate
- Notes
- Imported from mim-queue (source_id=mediadive.ingredient:1764); no CAS-RN or CHEBI/NCIT match. Reviewed on 2026-05-11 as a concentration-specific sodium bicarbonate stock solution pending component-level recipe curation.
Synonyms (3)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| 84 g/L NaHCO3 solution | RAW_TEXT | mim-queue | |
| (5% w/v solution) | RAW_TEXT | sssom_other_backfill | |
| (after autoclaving) | RAW_TEXT | sssom_other_backfill |
Evidence (1)
DATABASE_MATCH
via MIM curation (#288)
A prepared solution of a single compound: STOCK_SOLUTION, so it takes a kgmicrobe.ingredient: mint rather than the compound's own identifier, with a narrowMatch to that compound — the shape used for MES/PIPES/MOPS buffers in #114. For PBS, note the term is NCIT:C178908 'phosphate-buffered saline'; searching the bare acronym instead returns NCIT:C122728 'TSPO wt Allele', a gene allele (#288).
Occurrence statistics
- Total occurrences
- 1
- Distinct media
- 1
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-04-30T18:43:03.698454+00:00 | audit_import_ingredients[mim-queue] | CREATED_AS_UNMAPPED | UNMAPPED | Imported from mim-queue (source_id=mediadive.ingredient:1764); no CAS-RN or CHEBI/NCIT match. Curator review needed. |
| 2026-05-11T18:50:00Z | mediaingredientmech-agentic-curation LLM | CLASSIFIED_STOCK_SOLUTION | UNMAPPED | Classified as a concentration-specific sodium bicarbonate stock solution and left unmapped rather than identity-mapping to neat sodium bicarbonate. |
| 2026-08-06T00:00:00+00:00 | promote_resolved_unmapped | PROMOTED_TO_MAPPED | MAPPED | Promoted UNMAPPED_0321 -> kgmicrobe.ingredient:84_gl_nahco3_solution "sodium hydrogencarbonate" (NARROW_MATCH); mapping_status UNMAPPED -> MAPPED, SSSOM row added. |
| 2026-08-27T03:16:39.518154+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 0/0 -> 1/1 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-09-02T17:40:44.716277+00:00 | claude_sssom_surface_form_backfill | ADDED_SYNONYMS | Recovered 1 surface form(s) that the published SSSOM `other` carried but no curated record did, so a rebuild would have dropped them from KGX: '(5% w/v solution)'. Tokens already present on the kg-microbe ontology node were left out as redundant (#520). | |
| 2026-09-02T22:41:49.137449+00:00 | claude_sssom_surface_form_backfill | ADDED_SYNONYMS | Recovered 1 surface form(s) that the published SSSOM `other` carried but no curated record did, so a rebuild would have dropped them from KGX: '(after autoclaving)'. Tokens already present on the kg-microbe ontology node were left out as redundant (#520). |