Ontology mapping
- Primary identifier
-
kgmicrobe.compound:abyssomicin_g - Notes
- 2026-05-10 manual candidate review: retained kgmicrobe.compound primary identifier; reviewed OLS candidates were not exact identity matches for the source label.
Physicochemical roles
- Role
- SELECTIVE_AGENT
- Confidence
- 0.8
- Evidence
- Reference type
- COMPUTATIONAL_PREDICTION
- Reference text
- Inferred from curated media-role name pattern
- Curator note
- Provisional role from a curated name-pattern rule; review recommended.
Evidence (1)
DATABASE_MATCH
via kg-microbe metatraits unmapped_compounds.tsv
Imported from kg-microbe's unmapped placeholder namespace. Ingested into MIM's pipeline; confidence=LOW; rationale=5 candidates; top OLS candidates: CHEBI:70593(Abyssomicin I), CHEBI:86623(G a G b G), CHEBI:86642(G c G). Pending curator promotion to a CHEBI/NCIT primary identifier.
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-04-26T04:54:19.839959+00:00 | audit_curate_unmapped_kgm_antibiotics | CREATED_FROM_KGM_PLACEHOLDER | MAPPED | Created MIM record from kg-microbe placeholder kgmicrobe.compound:abyssomicin_g; OLS search across CHEBI+NCIT returned LOW-confidence (5 candidates). Identifier kept as kgmicrobe.compound: until upstream curation finds a CHEBI/NCIT primary. |
| 2026-05-01T07:35:32.006605+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (kgmicrobe.compound placeholder (defined)) | |
| 2026-05-02T03:12:12.237883+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (kgmicrobe.compound placeholder (defined)) | |
| 2026-05-10T04:42:27+00:00 | mediaingredientmech-agentic-curation LLM | ANNOTATED | MAPPED | Reviewed UNKNOWN_TERM manual candidate artifact; OLS candidates were different named compounds or unrelated lexical hits, so kgmicrobe.compound:abyssomicin_g was retained without ontology promotion. |
| 2026-06-02T07:05:13.385852+00:00 | infer_roles_from_name_lists | ANNOTATED | Added media role: SELECTIVE_AGENT (confidence: 0.80) | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): SELECTIVE_AGENT -> physicochemical_roles.SELECTIVE_AGENT |