Ontology mapping
- Primary identifier
-
CHEBI:33658 - Ontology label
- arene
Evidence (3)
Imported from kgm-metatraits via source-preset. source_id=kgm.metatraits.special:aromatic_hydrocarbon;
mapping_quality EXACT_MATCH -> BROAD_MATCH. CHEBI:33848 carries no structural definition, so it is a class rather than an individual, and the record's label 'Aromatic hydrocarbon' does not equal the term label 'polycyclic arene'. EXACT_MATCH therefore asserted an identity the pair does not have. Re-graded because the record is BROADER than the term: benzene is an aromatic hydrocarbon and is not a polycyclic arene, so narrowMatch would be backwards.
Regrounded CHEBI:33848 (kgmicrobe.compound:aromatic_hydrocarbon) -> CHEBI:33658 'arene'. CHEBI:33658 is defined as 'Any monocyclic or polycyclic aromatic hydrocarbon', which is exactly what this record names; CHEBI:33848 'polycyclic arene' is a proper subset of it. The old shape asserted skos:broadMatch — the corpus's only one — and kg-microbe's consolidator reads narrowMatch and broadMatch identically as 'the MIM subject is NARROWER than the object', so it published this record as a CHILD of polycyclic arene: backwards, and chemically false. The record's own history carried both readings, the regrade calling it broader and the mint that followed calling it narrower. Grounding at the term that actually denotes it makes the mapping symmetric and true, which removes the disagreement rather than arguing about direction, and retires a registry mint the record never needed — a mint gives identity to a record NARROWER than every available term. Not a #322 class overstatement: both sides are the same class.
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-04-30T20:14:01.918670+00:00 | audit_import_ingredients[kgm-metatraits] | CREATED_FROM_INGREDIENT_IMPORT | MAPPED | Imported from kgm-metatraits via source-preset. source_id=kgm.metatraits.special:aromatic_hydrocarbon; |
| 2026-05-01T07:35:32.260225+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-02T03:12:12.584332+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-08-13T00:00:00+00:00 | regrade_class_overstatements | REGRADED_CLASS_OVERSTATEMENT | mapping_quality EXACT_MATCH -> BROAD_MATCH (#322); the record is BROADER than the term: benzene is an aromatic hydrocarbon and is not a polycyclic arene, so narrowMatch would be backwards. | |
| 2026-08-13T00:00:00+00:00 | mint_registry_for_narrow_records | MINTED_REGISTRY_IDENTIFIER | identifier CHEBI:33848 -> kgmicrobe.compound:aromatic_hydrocarbon. The record is narrower than CHEBI:33848 (source-, form- or scope-qualified), and §3 forbids expressing a more specific thing by sharing a broader term's identifier. Minted per step 3. (#322) Required by SSSOM Rule B1 once the mapping was re-graded to narrow/broad. | |
| 2026-08-18T00:00:00+00:00 | reground_aromatic_hydrocarbon | REGROUNDED_TO_DENOTING_TERM | Regrounded CHEBI:33848 (kgmicrobe.compound:aromatic_hydrocarbon) -> CHEBI:33658 'arene'. CHEBI:33658 is defined as 'Any monocyclic or polycyclic aromatic hydrocarbon', which is exactly what this record names; CHEBI:33848 'polycyclic arene' is a proper subset of it. The old shape asserted skos:broadMatch — the corpus's only one — and kg-microbe's consolidator reads narrowMatch and broadMatch identically as 'the MIM subject is NARROWER than the object', so it published this record as a CHILD of polycyclic arene: backwards, and chemically false. The record's own history carried both readings, the regrade calling it broader and the mint that followed calling it narrower. Grounding at the term that actually denotes it makes the mapping symmetric and true, which removes the disagreement rather than arguing about direction, and retires a registry mint the record never needed — a mint gives identity to a record NARROWER than every available term. Not a #322 class overstatement: both sides are the same class. |