Ontology mapping
- Primary identifier
-
CHEBI:86159 - Ontology label
- calcium nitrate tetrahydrate
Nutritional roles
- Role
- MINERAL_SOURCE
- Confidence
- 1.0
- Evidence
- Reference type
- DATABASE_ENTRY
- Reference text
- Imported from CultureMech pipeline
- Curator note
- Original role text: Mineral
Synonyms (16)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| (1) Ca(NO3)2.4H2O | HYDRATE_FORM | kg_microbe | |
| Ca(NO3)2 x 4 H2O (0.1% w/v) | HYDRATE_FORM | kg_microbe | |
| Ca(NO3)2 · 4H2O | HYDRATE_FORM | kg_microbe | |
| Ca(NO3)2.4H2O | HYDRATE_FORM | kg_microbe | |
| Ca(NO3)2x4H2O | HYDRATE_FORM | kg_microbe | |
| Ca(NO3)2·4H2O | HYDRATE_FORM | kg_microbe | |
| Ca(NO3)2・4H2O | HYDRATE_FORM | kg_microbe | |
| Calcium dinitrate tetrahydrate | EXACT_SYNONYM | kg_microbe | |
| Calcium nitrate tetrahydrate | EXACT_SYNONYM | kg_microbe | |
| Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component | RAW_TEXT | CultureMech | |
| Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component | RAW_TEXT | CultureMech | |
| Role: Mineral source; Properties: Simple component, Defined component, Inorganic compound | RAW_TEXT | CultureMech | |
| calcium nitrate--water (1/4) | EXACT_SYNONYM | chebi_synonym_review | |
| Ca(NO3)2•4H2O | RAW_TEXT | culturemech:output/ingredient_occurrences.tsv | |
| Ca(NO3)2•4H2O(CAS: 13477-34-4) | RAW_TEXT | CultureMech | |
| (1) Ca(NO3)2 | RAW_TEXT | sssom_other_backfill |
Chemical properties
- Cas rn
- 13477-34-4
- Data source
- PubChem (via CHEBI:86159)
- Retrieval date
- 2026-04-09T00:32:50.689620+00:00
- Molecular formula
- Ca.4H2O.2NO3
- Inchi
- InChI=1S/Ca.2NO3.4H2O/c;2*2-1(3)4;;;;/h;;;4*1H2/q+2;2*-1;;;;
- Smiles
- O.O.O.O.O=[N+]([O-])[O-].O=[N+]([O-])[O-].[Ca+2]
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 202
- Distinct media
- 202
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T21:48:44.783124+00:00 | fetch_cas_rn_from_culturebot_csv | ADDED_CAS_RN | MAPPED | Added CAS-RN:13477-34-4 from CultureBotHT compounds_to_cas.csv (matched: Ca(NO3)2·4H2O) |
| 2026-04-07T10:19:08.045723+00:00 | feba_ontology_enrichment_batch | CREATED | MAPPED | Created ingredient file from FEBA ontology enrichment batch with ChEBI ID CHEBI:86159 |
| 2026-04-09T00:32:50.689620+00:00 | enrich_mim_cas_rn_batch | CAS_RN_ADDED | MAPPED | Added CAS-RN 13477-34-4 from PubChem (via CHEBI:86159) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 9 synonyms from kg-microbe P4.4 enrichment: (1) Ca(NO3)2.4H2O, Ca(NO3)2 x 4 H2O (0.1% w/v), Ca(NO3)2 · 4H2O, Ca(NO3)2.4H2O, Ca(NO3)2x4H2O, ... (4 more) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 8 synonyms from kg-microbe P4.4 enrichment: (1) Ca(NO3)2.4H2O, Ca(NO3)2 x 4 H2O, Ca(NO3)2 x 4 H2O (0.1% w/v), Ca(NO3)2 · 4H2O, Ca(NO3)2.4H2O, ... (3 more) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 9 synonyms from kg-microbe P4.4 enrichment: (1) Ca(NO3)2.4H2O, Ca(NO3)2 x 4 H2O, Ca(NO3)2 x 4 H2O (0.1% w/v), Ca(NO3)2 · 4H2O, Ca(NO3)2.4H2O, ... (4 more) |
| 2026-04-19T07:23:20.785693+00:00 | audit_mim_merge | MERGED_FROM_DUPLICATES | MAPPED | Absorbed 2 duplicate MIM record(s) into this one: Ca_No324h2o.yaml, Calcium_nitrate_tetrahydrate.yaml. Synonyms, curation_history, and occurrence counts were unioned/summed; winner selected by highest occurrence count with preferred_term readability tie-break. |
| 2026-05-01T07:35:32.495726+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:28.314026+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=Ca.4H2O.2NO3; inchi=InChI=1S/Ca.2NO3.4H2O/c;2*2-1(3)4;;;;/h;;;4*1H2/q+; smiles=O.O.O.O.O=[N+]([O-])[O-].O=[N+]([O-])[O-].[Ca+2] | |
| 2026-05-02T03:12:12.950671+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-29T23:35:36.110315+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: MINERAL (confidence: 1.00) | |
| 2026-06-09T05:23:46.732873+00:00 | correct_stale_ontology_labels.py | CORRECTED | ontology_label 'Ca(NO3)2 x 4 H2O' -> 'calcium nitrate tetrahydrate': synced to canonical CHEBI label (preferred_term 'Ca(NO3)2 x 4 H2O' unchanged). | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): MINERAL -> nutritional_roles.MINERAL_SOURCE | |
| 2026-08-27T03:16:39.518471+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 59/146 -> 199/199 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-08-30T04:48:06.233536+00:00 | claude_culturemech_alias_backfill | ADDED_SYNONYMS | Added 1 CultureMech recipe surface form(s) that folded onto this record's published label but were absent from MIM's label index, so CultureMech could not resolve them: 'Ca(NO3)2•4H2O' (x1 CultureMech mentions). Source: culturemech:output/ingredient_occurrences.tsv. | |
| 2026-09-02T17:40:44.716277+00:00 | claude_sssom_surface_form_backfill | ADDED_SYNONYMS | Recovered 1 surface form(s) that the published SSSOM `other` carried but no curated record did, so a rebuild would have dropped them from KGX: '(1) Ca(NO3)2'. Tokens already present on the kg-microbe ontology node were left out as redundant (#520). | |
| 2026-10-03T07:30:00+00:00 | yaml_record_review | MERGED_SOURCE_OCCURRENCE | Moved the CAS-qualified Ca(NO3)2•4H2O source label and three CultureMech occurrences from stale UNMAPPED_0049 onto this calcium nitrate tetrahydrate identity; the truncated Ca placeholder was retired instead of mapping to elemental calcium. |