Ontology mapping
- Primary identifier
-
cas:9001-05-2 - Ontology term
-
mesh:D002374— Catalase
Synonyms (3)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Properties: Defined component, Simple component | RAW_TEXT | CultureMech | |
| Properties: Simple component, Defined component | RAW_TEXT | CultureMech | |
| Catalase (Sigma C--10) | CATALOG_VARIANT | culturemech:output/ingredient_occurrences.tsv |
Chemical properties
- Cas rn
- 9001-05-2
- Data source
- CAS registry number of catalase, EC 1.11.1.6 (enzyme, no single structure)
Evidence (2)
DATABASE_MATCH
via CultureMech
SUPERSEDED (#312): Imported from CultureMech pipeline, quality=DIRECT_MATCH
MANUAL_CURATION
via MIM curation (#312); chebi.db
identifier NCIT:C61062 -> cas:9001-05-2; ontology NCIT:C61062 ('Catalase') -> mesh:D002374 ('Catalase'); mapping_quality EXACT_MATCH -> NARROW_MATCH. ncit.db defines NCIT:C61062 'Catalase' as 'Catalase (527 aa, ~60 kDa) is encoded by the human CAT gene' (Swiss-Prot P04040, R54 -> NCIT:C61060 CAT Gene): the human gene product, not the media reagent (Sigma C-10, bovine liver). skos:exactMatch would substitute that node for the reagent. Follow the protein-reagent siblings Bovine_Serum_Albumin and Lysozyme: identifier is the enzyme's CAS 9001-05-2 (EC 1.11.1.6), broadMatch to the species-neutral MeSH descriptor mesh:D002374 'Catalase', Rule B1 registry row.
Occurrence statistics
- Total occurrences
- 34
- Distinct media
- 34
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-05-01T07:35:32.659756+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-02T03:12:13.174638+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-06-10T06:49:42.119337+00:00 | fix_dead_chebi_ids.py | CORRECTED | identifier CHEBI:3463 -> NCIT:C61062 (Catalase, source NCIT): CHEBI:3463 is absent from current ChEBI (OLS4 404). | |
| 2026-08-27T03:16:39.518532+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 26/26 -> 34/34 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-08-30T04:48:06.233536+00:00 | claude_culturemech_alias_backfill | ADDED_SYNONYMS | Added 1 CultureMech recipe surface form(s) that folded onto this record's published label but were absent from MIM's label index, so CultureMech could not resolve them: 'Catalase (Sigma C--10)' (x1 CultureMech mentions). Source: culturemech:output/ingredient_occurrences.tsv. | |
| 2026-09-23T00:44:54.489778+00:00 | claude LLM | REGROUNDED_IDENTITY | MAPPED | identifier NCIT:C61062 -> cas:9001-05-2; ontology NCIT:C61062 ('Catalase') -> mesh:D002374 ('Catalase'); mapping_quality EXACT_MATCH -> NARROW_MATCH. ncit.db defines NCIT:C61062 'Catalase' as 'Catalase (527 aa, ~60 kDa) is encoded by the human CAT gene' (Swiss-Prot P04040, R54 -> NCIT:C61060 CAT Gene): the human gene product, not the media reagent (Sigma C-10, bovine liver). skos:exactMatch would substitute that node for the reagent. Follow the protein-reagent siblings Bovine_Serum_Albumin and Lysozyme: identifier is the enzyme's CAS 9001-05-2 (EC 1.11.1.6), broadMatch to the species-neutral MeSH descriptor mesh:D002374 'Catalase', Rule B1 registry row. (#312) |