Ontology mapping
- Primary identifier
-
CHEBI:16261 - Ontology label
- chitosan
Nutritional roles
- Role
- CARBON_SOURCE
- Confidence
- 1.0
- Evidence
- Reference type
- DATABASE_ENTRY
- Reference text
- Imported from CultureMech pipeline
- Curator note
- Original role text: Carbon Source
Synonyms (6)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Role: Carbon source; Properties: Organic compound, Simple component, Defined component | RAW_TEXT | CultureMech | |
| (1->4)-2-amino-2-deoxy-beta-D-glucan | EXACT_SYNONYM | kg_microbe | |
| Deacetylchitin | EXACT_SYNONYM | kg_microbe | |
| [4)-beta-D-GlcpN(1->]n | EXACT_SYNONYM | kg_microbe | |
| beta-1,4-Poly-D-glucosamine | EXACT_SYNONYM | kg_microbe | |
| poliglusam | EXACT_SYNONYM | kg_microbe |
Rejected enrichment labels (1)
Provenance-only candidates: these are not synonyms and do not resolve to this record.
| Rejected label | Disposition | Source | Occurrences |
|---|---|---|---|
| hydrolysis: cationic chitosan | REJECTED_LABEL | kg_microbe |
Chemical properties
- Cas rn
- 9012-76-4
- Data source
- CultureBotHT compounds_to_cas.csv
- Retrieval date
- 2026-04-05T21:48:44.851637+00:00
- Molecular formula
- (C6H11NO4)n.H2O
- Inchi
- InChI=1S/C6H13NO5/c7-3-5(10)4(9)2(1-8)12-6(3)11/h2-6,8-11H,1,7H2/t2-,3-,4-,5-,6-/m1/s1
- Smiles
- [H]O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1N
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 3
- Distinct media
- 3
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T21:48:44.851639+00:00 | fetch_cas_rn_from_culturebot_csv | ADDED_CAS_RN | MAPPED | Added CAS-RN:9012-76-4 from CultureBotHT compounds_to_cas.csv (matched: Chitosan) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 6 synonyms from kg-microbe P4.4 enrichment: (1->4)-2-amino-2-deoxy-beta-D-glucan, Deacetylchitin, [4)-beta-D-GlcpN(1->]n, beta-1,4-Poly-D-glucosamine, hydrolysis: cationic chitosan, ... (1 more) |
| 2026-05-01T07:35:32.752686+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:28.586204+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=(C6H11NO4)n.H2O; inchi=InChI=1S/C6H13NO5/c7-3-5(10)4(9)2(1-8)12-6(3)11/h2; smiles=[H]O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1N | |
| 2026-05-02T03:12:13.318508+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-29T23:35:36.110476+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: CARBON_SOURCE (confidence: 1.00) | |
| 2026-06-09T05:23:46.741133+00:00 | correct_stale_ontology_labels.py | CORRECTED | ontology_label 'Chitosan' -> 'chitosan': synced to canonical CHEBI label (preferred_term 'Chitosan' unchanged). | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): CARBON_SOURCE -> nutritional_roles.CARBON_SOURCE | |
| 2026-08-27T03:16:39.518556+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 2/2 -> 3/3 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-09-22T06:14:49.563933+00:00 | claude LLM | REJECTED_TRAIT_SYNONYMS | Retyped activity/assay phrases as provenance-only REJECTED_LABEL because they describe a process or organism trait, not an ingredient name (#703): 'hydrolysis: cationic chitosan'. Preserved original text and source metadata. No identity, mapping, role, or remaining-synonym claim was adjudicated. |