Ontology mapping
- Primary identifier
-
CHEBI:17562 - Ontology label
- cytidine
- Notes
- Created from FEBA ontology enrichment workflow. Used in 14 FEBA media formulations.
Synonyms (10)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| 1-beta-D-Ribofuranosylcytosine | EXACT_SYNONYM | kg_microbe | |
| 1beta-D-ribofuranosylcytosine | EXACT_SYNONYM | kg_microbe | |
| 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE | EXACT_SYNONYM | kg_microbe | |
| 4-amino-1-beta-D-ribofuranosylpyrimidin-2(1H)-one | EXACT_SYNONYM | kg_microbe | |
| 4-amino-1beta-D-ribofuranosyl-2(1H)-pyrimidinone | EXACT_SYNONYM | kg_microbe | |
| Cyd | EXACT_SYNONYM | kg_microbe | |
| Cytidin | EXACT_SYNONYM | kg_microbe | |
| Cytosine riboside | EXACT_SYNONYM | kg_microbe | |
| Zytidin | EXACT_SYNONYM | kg_microbe | |
| cytosine-1beta-D-Ribofuranoside | EXACT_SYNONYM | kg_microbe |
Chemical properties
- Cas rn
- 65-46-3
- Data source
- FEBA ontology enrichment (via PubChem)
- Retrieval date
- 2026-04-07T10:19:14.433370+00:00
- Molecular formula
- C9H13N3O5
- Inchi
- InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6(14)4(3-13)17-8/h1-2,4,6-8,13-15H,3H2,(H2,10,11,16)/t4-,6-,7-,8-/m1/s1
- Smiles
- Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1
Evidence (1)
CAS_RN_CROSS_REFERENCE
via PubChem
ChEBI ID CHEBI:17562 found via PubChem CAS-RN cross-reference
Occurrence statistics
- Total occurrences
- 15
- Distinct media
- 15
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-04-07T10:19:14.433360+00:00 | feba_ontology_enrichment_batch | CREATED | MAPPED | Created ingredient file from FEBA ontology enrichment batch with ChEBI ID CHEBI:17562 |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 10 synonyms from kg-microbe P4.4 enrichment: 1-beta-D-Ribofuranosylcytosine, 1beta-D-ribofuranosylcytosine, 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, 4-amino-1-beta-D-ribofuranosylpyrimidin-2(1H)-one, 4-amino-1beta-D-ribofuranosyl-2(1H)-pyrimidinone, ... (5 more) |
| 2026-05-01T07:35:33.028526+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:28.940169+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=C9H13N3O5; inchi=InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6; smiles=Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1 | |
| 2026-05-02T03:12:13.689087+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-08-27T03:16:39.518678+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 14/14 -> 15/15 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] |