Ontology mapping
- Primary identifier
-
cas:54010-71-8 - Ontology term
-
CHEBI:14314— D-glucose 6-phosphate - Ontology label
- D-glucose 6-phosphate
Nutritional roles
- Role
- CARBON_SOURCE
- Confidence
- 0.8
- Evidence
- Reference type
- COMPUTATIONAL_PREDICTION
- Reference text
- Inferred from curated media-role name pattern
- Curator note
- Provisional role from a curated name-pattern rule; review recommended.
Chemical properties
- Cas rn
- 54010-71-8
- Data source
- CultureBotHT compounds_to_cas.csv
- Retrieval date
- 2026-04-29T06:51:33.117170+00:00
- Molecular formula
- C6H12NaO9P
- Smiles
- C(C(C(C(C(C=O)O)O)O)O)OP(=O)(O)[O-].[Na+]
- Inchi
- InChI=1S/C6H13O9P.Na/c7-1-3(8)5(10)6(11)4(9)2-15-16(12,13)14;/h1,3-6,8-11H,2H2,(H2,12,13,14);/q;+1/p-1/t3-,4+,5+,6+;/m0./s1
- Pubchem cid
- 23677332
Evidence (3)
Imported from CultureBotHT. CAS-RN 54010-71-8 present, but no CHEBI entry exists (checked OAK CHEBI sqlite + PubChem CID synonyms). FEBA/Hans80 panels: FEBA_carbon. Used in 1 CultureBot media; samples: Surya_sugar_mix. Curator can promote to a CHEBI primary if/when CHEBI adds the term.
Parent class identified via stem-substring; matched_via='D-Glucose-6-Phosphate sodium salt'
narrowMatch parent CHEBI:26714 ('sodium salt') -> CHEBI:14314 ('D-glucose 6-phosphate'). The previous parent was the class of all sodium salts: it retained the counterion and discarded the compound, collapsing unrelated ingredients onto one node. Chosen because it is the compound the label names. The record stays cas-primary per MAPPING_SEMANTICS §3 step 2; only the parent moves.
Occurrence statistics
- Total occurrences
- 1
- Distinct media
- 1
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-04-29T06:51:33.117170+00:00 | audit_add_remaining_culturebotht | CREATED_FROM_CAS_FALLBACK | MAPPED | Created with cas:54010-71-8 as primary identifier; no CHEBI entry exists for this compound. |
| 2026-05-01T07:35:33.078026+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (cas: primary (defined chemical)) | |
| 2026-05-02T02:52:32.688559+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_PUBCHEM_CHEMISTRY | molecular_formula=C6H12NaO9P; smiles=C(C(C(C(C(C=O)O)O)O)O)OP(=O)(O)[O-].[Na+]; inchi=InChI=1S/C6H13O9P.Na/c7-1-3(8)5(10)6(11)4(9)2-15-1 | |
| 2026-05-02T03:12:13.759730+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-02T04:44:58.959180+00:00 | backfill_parent_terms | BACKFILL_PARENT_CHEBI | set ontology_mapping parent=CHEBI:26714 (stem-substring) | |
| 2026-06-03T02:06:01.738518+00:00 | infer_roles_from_name_lists | ANNOTATED | Added media role: CARBON_SOURCE (confidence: 0.80) | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): CARBON_SOURCE -> nutritional_roles.CARBON_SOURCE | |
| 2026-08-13T00:00:00+00:00 | reground_compositional_classes | REGROUNDED_PARENT_TERM | ontology_mapping CHEBI:26714 'sodium salt' -> CHEBI:14314 'D-glucose 6-phosphate' (#322); the compound the label names. |