Ontology mapping
- Primary identifier
-
CHEBI:15824 - Ontology label
- D-fructose
Nutritional roles
- Role
- CARBON_SOURCE
- Confidence
- 1.0
- Evidence
- Reference type
- DATABASE_ENTRY
- Reference text
- Imported from CultureMech pipeline
- Curator note
- Original role text: Carbon Source
- Role
- ENERGY_SOURCE
- Confidence
- 0.7
- Evidence
- Reference type
- COMPUTATIONAL_PREDICTION
- Reference text
- Canonical energy substrate (catabolised for energy)
- Curator note
- Provisional ENERGY_SOURCE added alongside CARBON_SOURCE; review recommended.
Synonyms (8)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Cross-references: KEGG:fru | RAW_TEXT | CultureMech | |
| Role: Carbon source; Properties: Organic compound, Defined component, Simple component | RAW_TEXT | CultureMech | |
| (-)-D-fructose | EXACT_SYNONYM | kg_microbe | |
| (2)-d-fructose | EXACT_SYNONYM | kg_microbe | |
| D-Fru | EXACT_SYNONYM | kg_microbe | |
| D-arabino-hex-2-ulose | EXACT_SYNONYM | kg_microbe | |
| D-laevulose | EXACT_SYNONYM | kg_microbe | |
| Laevulose | EXACT_SYNONYM | kg_microbe |
Rejected enrichment labels (1)
Provenance-only candidates: these are not synonyms and do not resolve to this record.
| Rejected label | Disposition | Source | Occurrences |
|---|---|---|---|
| Optional ingredient | REJECTED_LABEL | CultureMech |
Chemical properties
- Cas rn
- 57-48-7
- Data source
- CultureBotHT/compounds_to_cas.csv
- Retrieval date
- 2026-04-09T00:32:50.689620+00:00
- Molecular formula
- C6H12O6
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 53
- Distinct media
- 53
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T19:51:41.948081+00:00 | fetch_cas_rn_from_pubchem | ADDED_CAS_RN | MAPPED | Added CAS-RN:200-333-3 from PubChem API via name lookup (D-Fructose) |
| 2026-04-09T00:32:50.689620+00:00 | enrich_mim_cas_rn_batch | CAS_RN_ADDED | MAPPED | Added CAS-RN 57-48-7 from CultureBotHT/compounds_to_cas.csv |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 6 synonyms from kg-microbe P4.4 enrichment: (-)-D-fructose, (2)-d-fructose, D-Fru, D-arabino-hex-2-ulose, D-laevulose, ... (1 more) |
| 2026-05-01T07:35:33.117384+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:29.041620+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=C6H12O6 | |
| 2026-05-02T03:12:13.821212+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-29T23:35:36.110865+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: CARBON_SOURCE (confidence: 1.00) | |
| 2026-06-04T05:38:59.200645+00:00 | infer_energy_source | ANNOTATED | Added media role: ENERGY_SOURCE (confidence: 0.70) | |
| 2026-06-09T05:23:46.751601+00:00 | correct_stale_ontology_labels.py | CORRECTED | ontology_label 'D-Fructose' -> 'D-fructose': synced to canonical CHEBI label (preferred_term 'D-Fructose' unchanged). | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): CARBON_SOURCE -> nutritional_roles.CARBON_SOURCE; ENERGY_SOURCE -> nutritional_roles.ENERGY_SOURCE | |
| 2026-08-27T03:16:39.518694+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 36/36 -> 53/53 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-09-23T06:21:57.573140+00:00 | claude LLM | REJECTED_WRONG_FORM_SYNONYMS | MAPPED | Retyped REJECTED_LABEL: 'Optional ingredient' (RAW_TEXT): a CultureMech recipe annotation, not a name of D-fructose (#232). The token is kept as provenance only; it must not resolve, be exported, or enter the SSSOM other column. |