Ontology mapping
- Primary identifier
-
CHEBI:15588 - Ontology label
- (R)-malate(2-)
- Notes
- Imported from microbedecoder (source_id=kgmicrobe.trait:d_malate); no CAS-RN or CHEBI/NCIT match. Curator review needed.
Synonyms (1)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| D-malate | RAW_TEXT | microbedecoder |
Chemical properties
- Molecular formula
- C4H4O5
- Smiles
- O=C([O-])C[C@@H](O)C(=O)[O-]
- Inchi
- InChI=1S/C4H6O5/c5-2(4(8)9)1-3(6)7/h2,5H,1H2,(H,6,7)(H,8,9)/p-2/t2-/m1/s1
- Molecular weight
- 132.071
- Data source
- ChEBI+PubChem
- Retrieval date
- 2026-08-13T04:15:18.269130+00:00
Evidence (1)
DATABASE_MATCH
via MIM curation (#213)
D-malate is (R)-malate; CHEBI:15588 '(R)-malate(2-)' is the fully-deprotonated species at medium pH, per the anion convention in this issue (#213).
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
- Source occurrences
- Source
- microbedecoder
- Count
- 33
- Source columns
- BacDive_Metabolite_utilization
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-08-04T02:54:09.684805+00:00 | audit_import_ingredients[microbedecoder] | CREATED_AS_UNMAPPED | UNMAPPED | Imported from microbedecoder (source_id=kgmicrobe.trait:d_malate); no CAS-RN or CHEBI/NCIT match. Curator review needed. |
| 2026-08-06T00:00:00+00:00 | promote_resolved_unmapped | PROMOTED_TO_MAPPED | MAPPED | Promoted UNMAPPED_0640 -> CHEBI:15588 "(R)-malate(2-)" (SYNONYM_MATCH); mapping_status UNMAPPED -> MAPPED, SSSOM row added. |
| 2026-08-13T00:00:00+00:00 | classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary with a structural definition) (#323) |