Ontology mapping
- Primary identifier
-
CHEBI:86254 - Ontology label
- iron trichloride hexahydrate
- kg-microbe node
CHEBI:86254
Nutritional roles
- Role
- IRON_SOURCE
- Confidence
- 1.0
- Evidence
- Reference text
- CultureMech database (413 occurrences as 'Mineral source')
- Reference type
- DATABASE_ENTRY
- Url
- https://github.com/CultureBotAI/CultureMech
- Excerpt
- Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component
- Curator note
- Widespread use in media formulations (413 occurrences). High confidence based on 'Defined component' property.
Synonyms (18)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component | RAW_TEXT | CultureMech | |
| FeCl3·6H2O | HYDRATE_FORM | merged_from_duplicate_mim_record | |
| FeCl3.6H2O | HYDRATE_FORM | merged_from_duplicate_mim_record | |
| Ferric chloride hexahydrate | EXACT_SYNONYM | unmapped_duplicate_review_2026_05_11 | |
| Iron (III) chloride hexahydrate | EXACT_SYNONYM | unmapped_duplicate_review_2026_05_11 | |
| Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component | RAW_TEXT | CultureMech | |
| Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound | RAW_TEXT | CultureMech | |
| Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component | RAW_TEXT | CultureMech | |
| Role: Mineral source; Properties: Simple component, Defined component, Inorganic compound | RAW_TEXT | CultureMech | |
| trichloroiron--water (1/6) | EXACT_SYNONYM | chebi_synonym_review | |
| FeCl3 . 6H2O | RAW_TEXT | sssom_other_backfill | |
| FeCl3 x 6 H2O (0.1% w/v in 0.2 N HCl) | RAW_TEXT | sssom_other_backfill | |
| FeCl3 x 6 H2O (0.5%) | RAW_TEXT | sssom_other_backfill | |
| FeCl3 x 6 H2O (w/v=1%) | RAW_TEXT | sssom_other_backfill | |
| FeCl3 x 6 H2O NaEDTA | RAW_TEXT | sssom_other_backfill | |
| FeCl3 x 6 H2O solution (2%) | RAW_TEXT | sssom_other_backfill | |
| FeCl3 x6H2O | RAW_TEXT | sssom_other_backfill | |
| FeCl3*6 H2O | RAW_TEXT | sssom_other_backfill |
Chemical properties
- Cas rn
- 10025-77-1
- Data source
- PubChem (via CHEBI:86254)
- Retrieval date
- 2026-04-09T00:32:50.689620+00:00
- Molecular formula
- Cl3Fe.6H2O
- Inchi
- InChI=1S/3ClH.Fe.6H2O/h3*1H;;6*1H2/q;;;+3;;;;;;/p-3
- Smiles
- O.O.O.O.O.O.[Cl][Fe]([Cl])[Cl]
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 618
- Distinct media
- 618
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T23:44:34.009705+00:00 | fetch_cas_rn_with_preprocessing | ADDED_CAS_RN | MAPPED | Added CAS-RN:600-047-2 from PubChem API (ontology label) via name preprocessing (FeCl3·6H2O) |
| 2026-04-05T23:44:34.341048+00:00 | fetch_cas_rn_with_preprocessing | ADDED_CAS_RN | MAPPED | Added CAS-RN:600-047-2 from PubChem API (ontology label) via name preprocessing (FeCl3.6H2O) |
| 2026-04-09T00:32:50.689620+00:00 | enrich_mim_cas_rn_batch | CAS_RN_ADDED | MAPPED | Added CAS-RN 10225-77-1 from PubChem (via CHEBI:86254) |
| 2026-04-19T07:23:20.785693+00:00 | audit_mim_merge | MERGED_FROM_DUPLICATES | MAPPED | Absorbed 2 duplicate MIM record(s) into this one: Fecl36h2o.yaml, Fecl36h2o_2.yaml. Synonyms, curation_history, and occurrence counts were unioned/summed; winner selected by highest occurrence count with preferred_term readability tie-break. |
| 2026-05-01T07:35:33.576582+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:29.558468+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=Cl3Fe.6H2O; inchi=InChI=1S/3ClH.Fe.6H2O/h3*1H;;6*1H2/q;;;+3;;;;;;/p-; smiles=O.O.O.O.O.O.[Cl][Fe]([Cl])[Cl] | |
| 2026-05-02T03:12:14.427580+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-11T04:22:30Z | mediaingredientmech-agentic-curation LLM | MERGED_FROM_UNMAPPED_DUPLICATE | MAPPED | Absorbed Ferric_Chloride_Hexahydrate.yaml, which was incorrectly mapped to CHEBI:82824 calpain inhibitor, and unmapped Iron_(III)_Chloride_Hexahydrate.yaml (UNMAPPED_0293); local CHEBI confirms CHEBI:86254 as iron trichloride hexahydrate with ferric/iron(III) chloride hexahydrate synonyms, and current CAS-RN was corrected to the local CHEBI xref. |
| 2026-05-29T23:35:36.111120+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: MINERAL (confidence: 1.00) | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): MINERAL -> nutritional_roles.IRON_SOURCE | |
| 2026-08-10T00:00:00+00:00 | regrade_synonym_matches | REGRADED_EXACT_TO_SYNONYM | mapping_quality EXACT_MATCH -> SYNONYM_MATCH (#317). The record's label does not equal the term's primary label 'iron trichloride hexahydrate'; it matches the ChEBI synonym 'Iron (III) chloride hexahydrate' on CHEBI:86254. The schema defines EXACT_MATCH as a direct match to the term and SYNONYM_MATCH as a match to a known synonym, so the recorded grade overstated. ontology_id is unchanged — the term is correct. The SSSOM predicate is unaffected (both grades emit skos:exactMatch). | |
| 2026-08-27T03:16:39.518845+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 103/413 -> 618/618 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-09-02T22:41:49.137449+00:00 | claude_sssom_surface_form_backfill | ADDED_SYNONYMS | Recovered 8 surface form(s) that the published SSSOM `other` carried but no curated record did, so a rebuild would have dropped them from KGX: 'FeCl3 . 6H2O'; 'FeCl3 x 6 H2O (0.1% w/v in 0.2 N HCl)'; 'FeCl3 x 6 H2O (0.5%)'; 'FeCl3 x 6 H2O (w/v=1%)'; 'FeCl3 x 6 H2O NaEDTA'; 'FeCl3 x 6 H2O solution (2%)'; 'FeCl3 x6H2O'; 'FeCl3*6 H2O'. Tokens already present on the kg-microbe ontology node were left out as redundant (#520). |