Ontology mapping
- Primary identifier
-
CHEBI:192761 - Ontology label
- ferrihydrite
- kg-microbe node
CHEBI:192761
Synonyms (10)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Role: Mineral source | RAW_TEXT | CultureMech | |
| Fe(III)-oxyhydroxide | EXACT_SYNONYM | kg_microbe | |
| amorphous fe(iii) oxyhydroxid | EXACT_SYNONYM | kg_microbe | |
| amorphous iron (iii) oxide | EXACT_SYNONYM | kg_microbe | |
| ferric hydroxide oxide | EXACT_SYNONYM | kg_microbe | |
| ferric oxy-hydroxide | EXACT_SYNONYM | kg_microbe | |
| ferric oxyhydroxide | EXACT_SYNONYM | kg_microbe | |
| iron hydroxide oxide | EXACT_SYNONYM | kg_microbe | |
| iron(III) oxyhydroxide | EXACT_SYNONYM | kg_microbe | |
| goethite | RAW_TEXT | sssom_other_backfill |
Rejected enrichment labels (5)
Provenance-only candidates: these are not synonyms and do not resolve to this record.
| Rejected label | Disposition | Source | Occurrences |
|---|---|---|---|
| electron acceptor: amorphous fe(iii) oxyhydroxid | REJECTED_LABEL | kg_microbe | |
| electron acceptor: amorphous iron (iii) oxide | REJECTED_LABEL | kg_microbe | |
| reduction: amorphous fe(iii) oxyhydroxid | REJECTED_LABEL | kg_microbe | |
| reduction: amorphous iron (iii) oxide | REJECTED_LABEL | kg_microbe | |
| growth: goethite | REJECTED_LABEL | sssom_other_backfill |
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 5
- Distinct media
- 5
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 12 synonyms from kg-microbe P4.4 enrichment: Fe(III)-oxyhydroxide, amorphous fe(iii) oxyhydroxid, amorphous iron (iii) oxide, electron acceptor: amorphous fe(iii) oxyhydroxid, electron acceptor: amorphous iron (iii) oxide, ... (7 more) |
| 2026-05-01T07:35:33.598095+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-02T03:12:14.450995+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-08-27T03:16:39.518854+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 4/4 -> 5/5 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-09-02T17:40:44.716277+00:00 | claude_sssom_surface_form_backfill | ADDED_SYNONYMS | Recovered 1 surface form(s) that the published SSSOM `other` carried but no curated record did, so a rebuild would have dropped them from KGX: 'goethite'. Tokens already present on the kg-microbe ontology node were left out as redundant (#520). | |
| 2026-09-02T22:41:49.137449+00:00 | claude_sssom_surface_form_backfill | ADDED_SYNONYMS | Recovered 1 surface form(s) that the published SSSOM `other` carried but no curated record did, so a rebuild would have dropped them from KGX: 'growth: goethite'. Tokens already present on the kg-microbe ontology node were left out as redundant (#520). | |
| 2026-09-22T06:14:49.563933+00:00 | claude LLM | REJECTED_TRAIT_SYNONYMS | Retyped activity/assay phrases as provenance-only REJECTED_LABEL because they describe a process or organism trait, not an ingredient name (#703): 'electron acceptor: amorphous fe(iii) oxyhydroxid'; 'electron acceptor: amorphous iron (iii) oxide'; 'reduction: amorphous fe(iii) oxyhydroxid'; 'reduction: amorphous iron (iii) oxide'; 'growth: goethite'. Preserved original text and source metadata. No identity, mapping, role, or remaining-synonym claim was adjudicated. |