Ontology mapping
- Primary identifier
-
CHEBI:75836 - Ontology label
- iron(2+) sulfate heptahydrate
- kg-microbe node
CHEBI:75836
Nutritional roles
- Role
- IRON_SOURCE
- Confidence
- 1.0
- Evidence
- Reference type
- DATABASE_ENTRY
- Reference text
- Imported from CultureMech pipeline
- Curator note
- Original role text: Mineral
Synonyms (2)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component | RAW_TEXT | CultureMech | |
| FeSO4 x7 H2O | HYDRATE_FORM | kg_microbe |
Rejected enrichment labels (8)
Provenance-only candidates: these are not synonyms and do not resolve to this record.
| Rejected label | Disposition | Source | Occurrences |
|---|---|---|---|
| FeSO4 x 5 H2O | REJECTED_LABEL | kg_microbe | |
| FeSO4 x 6 H2O | REJECTED_LABEL | kg_microbe | |
| FeSO4 x 6H2O | REJECTED_LABEL | kg_microbe | |
| FeSO4·6H2O | REJECTED_LABEL | kg_microbe | |
| FeSO4・6H2O | REJECTED_LABEL | kg_microbe | |
| ferrous sulfate (anhydrous) | REJECTED_LABEL | kg_microbe | |
| ferrous sulfate anhydrous | REJECTED_LABEL | kg_microbe | |
| iron(2+) sulfate | REJECTED_LABEL | chebi_synonym_review |
Chemical properties
- Cas rn
- 7782-63-0
- Data source
- PubChem API (ontology label)
- Retrieval date
- 2026-04-05T23:44:40.986504+00:00
- Molecular formula
- Fe.O4S.7H2O
- Inchi
- InChI=1S/Fe.H2O4S/c;1-5(2,3)4/h;(H2,1,2,3,4)/q+2;/p-2
- Smiles
- O=S(=O)([O-])[O-].[Fe+2]
Evidence (2)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
DATABASE_MATCH
via MIM curation (#321)
molecular_formula 'Fe.O4S' -> 'Fe.O4S.7H2O'. The recorded value described the anhydrous salt while the label names a hydrate, understating the mass by 18 g/mol per water. Corrected because the label states 7 water(s) of hydration, and the recorded formula was byte-identical to the anhydrous parent CHEBI:75832's ChEBI formula ('Fe.O4S') — the mark of a value inherited from the parent rather than measured for this record. Water appended in ChEBI's own dot-separated notation.
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T23:44:40.986514+00:00 | fetch_cas_rn_with_preprocessing | ADDED_CAS_RN | MAPPED | Added CAS-RN:7720-78-7 from PubChem API (ontology label) via name preprocessing (FeSO4 x 7H2O) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 8 synonyms from kg-microbe P4.4 enrichment: FeSO4 x 5 H2O, FeSO4 x 6 H2O, FeSO4 x 6H2O, FeSO4 x7 H2O, FeSO4·6H2O, ... (3 more) |
| 2026-05-01T07:35:33.632050+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:29.609295+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=Fe.O4S; inchi=InChI=1S/Fe.H2O4S/c;1-5(2,3)4/h;(H2,1,2,3,4)/q+2;/; smiles=O=S(=O)([O-])[O-].[Fe+2] | |
| 2026-05-02T03:12:14.491983+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-29T23:35:36.111167+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: MINERAL (confidence: 1.00) | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): MINERAL -> nutritional_roles.IRON_SOURCE | |
| 2026-08-10T00:00:00+00:00 | regrade_synonym_matches | REGRADED_EXACT_TO_SYNONYM | mapping_quality EXACT_MATCH -> SYNONYM_MATCH (#317). The record's label does not equal the term's primary label 'iron(2+) sulfate (anhydrous)'; it matches the ChEBI synonym 'ferrous sulfate anhydrous' on CHEBI:75832. The schema defines EXACT_MATCH as a direct match to the term and SYNONYM_MATCH as a match to a known synonym, so the recorded grade overstated. ontology_id is unchanged — the term is correct. The SSSOM predicate is unaffected (both grades emit skos:exactMatch). | |
| 2026-08-13T00:00:00+00:00 | add_water_of_hydration | ADDED_WATER_OF_HYDRATION | molecular_formula 'Fe.O4S' -> 'Fe.O4S.7H2O' (#321); the label states 7 water(s) of hydration, and the recorded formula was byte-identical to the anhydrous parent CHEBI:75832's ChEBI formula ('Fe.O4S') — the mark of a value inherited from the parent rather than measured for this record. Water appended in ChEBI's own dot-separated notation. | |
| 2026-08-15T00:00:00+00:00 | fix_hydrate_terms_and_twins | MERGED_INTO | Merged into CHEBI:75836 'FeSO4 x 7 H2O'; occurrences transferred. 'FeSO4 x 7H2O' and 'FeSO4 x 7 H2O' are the same substance written two ways — a missing space before H2O — so the pair escaped dedup, and the loser was then grounded to the nearest term lexical matching could reach: CHEBI:75832 ('iron(2+) sulfate (anhydrous)'), which does not carry the water its own label states. The #334 shadowing pattern. Found by cross-checking CultureBotAI/CultureMech#272, which grounds these labels correctly. Tombstoned REJECTED, SSSOM rows dropped. | |
| 2026-08-15T00:00:00+00:00 | fix_tombstone_pointers | REFRESHED_TOMBSTONE_ONTOLOGY_ID | ontology_id CHEBI:75832 -> CHEBI:75836 (#360). The merge set identifier and status but left ontology_mapping untouched, so this tombstone kept advertising a term it no longer asserts — anything indexing by ontology_id routed through it. Now agrees with the merge target 'FeSO4 x 7 H2O'. Provenance is unaffected: what the record used to assert is in this history. | |
| 2026-08-29T04:13:24.026340+00:00 | hydrate_family_cas | CORRECTED | cas_rn 7720-78-7 -> 7782-63-0. 7720-78-7 is the ANHYDROUS parent's CAS. This record is grounded to CHEBI:75836 iron(2+) sulfate heptahydrate, whose ChEBI dbxref is 7782-63-0 (#334). | |
| 2026-09-09T00:00:00+00:00 | fix_kg_microbe_node_id_drift | CORRECTED | kg_microbe_node_id CHEBI:75832 -> CHEBI:75836 (#554). The compatibility node id lagged a same-prefix identifier correction; the downstream node id must match the curated identifier unless a record intentionally crosses CURIE prefixes. | |
| 2026-09-22T20:41:14.285965+00:00 | claude LLM | REJECTED_PARENT_NAME_SYNONYMS | Retyped names of the parent compound or of a different hydrate as provenance-only REJECTED_LABEL, because this record is a distinct salt, hydrate or tombstone form and the label index resolved the parent's name here (#232): 'FeSO4 x 5 H2O'; 'FeSO4 x 6 H2O'; 'FeSO4 x 6H2O'; 'FeSO4·6H2O'; 'FeSO4・6H2O'; 'ferrous sulfate (anhydrous)'; 'ferrous sulfate anhydrous'; 'iron(2+) sulfate'. Preserved original text and source metadata. No identity, mapping, role, or remaining-synonym claim was adjudicated. |