Ontology mapping
- Primary identifier
-
CHEBI:16087 - Ontology label
- isocitrate(3-)
- Notes
- Imported from microbedecoder (source_id=kgmicrobe.trait:isocitrate); no CAS-RN or CHEBI/NCIT match. Curator review needed.
Synonyms (1)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Isocitrate | RAW_TEXT | microbedecoder |
Evidence (1)
DATABASE_MATCH
via MIM curation (#213)
Bare anion label 'Isocitrate' grounded to the fully-deprotonated isocitrate(3-), the species present at growth-medium pH. The bare name is NOT a registered CHEBI synonym of this term, hence CLOSE_MATCH rather than SYNONYM_MATCH. Naive first-match enumeration would have picked the mono-anion (#213).
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
- Source occurrences
- Source
- microbedecoder
- Count
- 7
- Source columns
- BacDive_Metabolite_utilization
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-08-04T02:54:09.684805+00:00 | audit_import_ingredients[microbedecoder] | CREATED_AS_UNMAPPED | UNMAPPED | Imported from microbedecoder (source_id=kgmicrobe.trait:isocitrate); no CAS-RN or CHEBI/NCIT match. Curator review needed. |
| 2026-08-06T00:00:00+00:00 | promote_resolved_unmapped | PROMOTED_TO_MAPPED | MAPPED | Promoted UNMAPPED_0685 -> CHEBI:16087 "isocitrate(3-)" (CLOSE_MATCH); mapping_status UNMAPPED -> MAPPED, SSSOM row added. |
| 2026-08-13T00:00:00+00:00 | classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary with a structural definition) (#323) |