Ontology mapping
- Primary identifier
-
kgmicrobe.compound:mgso4_x_6_h2o - Ontology term
-
CHEBI:32599— magnesium sulfate - Ontology label
- magnesium sulfate
Nutritional roles
- Role
- SULFUR_SOURCE
- Confidence
- 1.0
- Evidence
- Reference text
- CultureMech database (20 occurrences as 'Mineral source')
- Reference type
- DATABASE_ENTRY
- Url
- https://github.com/CultureBotAI/CultureMech
- Excerpt
- Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component
- Curator note
- Widespread use in media formulations (20 occurrences). High confidence based on 'Defined component' property.
- Role
- MINERAL_SOURCE
- Confidence
- 0.8
- Evidence
Synonyms (3)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| MgSO4 x 6H2O | HYDRATE_FORM | kg_microbe | |
| Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component | RAW_TEXT | CultureMech | |
| MgSO4·6H2O | HYDRATE_FORM | MIM curation (#652) |
Rejected enrichment labels (15)
Provenance-only candidates: these are not synonyms and do not resolve to this record.
| Rejected label | Disposition | Source | Occurrences |
|---|---|---|---|
| MgSO4 . 7H2O | REJECTED_LABEL | kg_microbe | |
| MgSO4 . H2O | REJECTED_LABEL | kg_microbe | |
| MgSO4 x 7 H2O (0.1% w/v) | REJECTED_LABEL | kg_microbe | |
| MgSO4 x 7 H2O (100 mM) | REJECTED_LABEL | kg_microbe | |
| MgSO4 x 7 H2O solution (25%) | REJECTED_LABEL | kg_microbe | |
| MgSO4 x 7 H2O to 15.0 g). | REJECTED_LABEL | kg_microbe | |
| MgSO4 x 7H2O | REJECTED_LABEL | kg_microbe | |
| MgSO4 x H2O | REJECTED_LABEL | kg_microbe | |
| MgSO4 x7 H2O | REJECTED_LABEL | kg_microbe | |
| MgSO4 x7H2O | REJECTED_LABEL | kg_microbe | |
| MgSO4 · 7H2O | REJECTED_LABEL | kg_microbe | |
| MgSO4 ·7H2O | REJECTED_LABEL | kg_microbe | |
| Mg2SO4 | REJECTED_LABEL | sssom_other_backfill | |
| MgSO .7H O | REJECTED_LABEL | sssom_other_backfill | |
| MgSO4 × 7 H2O | REJECTED_LABEL | sssom_other_backfill |
Chemical properties
- Molecular formula
- Mg.O4S.6H2O
- Data source
- MIM curation (#652)
Evidence (3)
Imported from CultureMech pipeline, quality=DIRECT_MATCH
molecular_formula 'Mg.O4S' -> 'Mg.O4S.6H2O'. The recorded value described the anhydrous salt while the label names a hydrate, understating the mass by 18 g/mol per water. Corrected because the label states 6 water(s) of hydration, and the recorded formula was byte-identical to the anhydrous parent CHEBI:32599's ChEBI formula ('Mg.O4S') — the mark of a value inherited from the parent rather than measured for this record. Water appended in ChEBI's own dot-separated notation.
MgSO4 x 6 H2O names a formula-supported hydrate, but no exact external ontology term is verified. CHEBI:32599 (magnesium sulfate) is retained only as the asymmetric anhydrous parent while the supplied hydrate keeps a local kgmicrobe.compound identity.
Occurrence statistics
- Total occurrences
- 35
- Distinct media
- 35
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T21:48:45.361651+00:00 | fetch_cas_rn_from_culturebot_csv | ADDED_CAS_RN | MAPPED | Added CAS-RN:7487-88-9 from CultureBotHT compounds_to_cas.csv (matched: MgSO4 x 6H2O) |
| 2026-04-09T00:32:50.689620+00:00 | enrich_mim_cas_rn_batch | CAS_RN_ADDED | MAPPED | Added CAS-RN 7487-88-9 from CultureBotHT/compounds_to_cas.csv |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 13 synonyms from kg-microbe P4.4 enrichment: MgSO4 . 7H2O, MgSO4 . H2O, MgSO4 x 6H2O, MgSO4 x 7 H2O (0.1% w/v), MgSO4 x 7 H2O (100 mM), ... (8 more) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 13 synonyms from kg-microbe P4.4 enrichment: MgSO4 . 7H2O, MgSO4 . H2O, MgSO4 x 6 H2O, MgSO4 x 7 H2O (0.1% w/v), MgSO4 x 7 H2O (100 mM), ... (8 more) |
| 2026-04-19T07:23:20.785693+00:00 | audit_mim_merge | MERGED_FROM_DUPLICATES | MAPPED | Absorbed 1 duplicate MIM record(s) into this one: Mgso4_X_6h2o.yaml. Synonyms, curation_history, and occurrence counts were unioned/summed; winner selected by highest occurrence count with preferred_term readability tie-break. |
| 2026-05-01T07:35:34.790505+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:30.833010+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=Mg.O4S; inchi=InChI=1S/Mg.H2O4S/c;1-5(2,3)4/h;(H2,1,2,3,4)/q+2;/; smiles=O=S(=O)([O-])[O-].[Mg+2] | |
| 2026-05-02T03:12:16.471454+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-29T23:35:36.111908+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: MINERAL (confidence: 1.00) | |
| 2026-06-09T05:23:46.797331+00:00 | correct_stale_ontology_labels.py | CORRECTED | ontology_label 'MgSO4 x 6 H2O' -> 'magnesium sulfate': synced to canonical CHEBI label (preferred_term 'MgSO4 x 6 H2O' unchanged). | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): MINERAL -> nutritional_roles.SULFUR_SOURCE | |
| 2026-07-20T20:01:42.981644+00:00 | migrate_media_roles_to_facets | CORRECTED | Added nutritional role(s) MINERAL_SOURCE missed by the initial #128 migration: the residual MINERAL_SOURCE bucket was suppressed whenever any other target existed, which dropped the bulk cation from salts whose other role describes the anion (e.g. MgSO4). | |
| 2026-08-13T00:00:00+00:00 | add_water_of_hydration | ADDED_WATER_OF_HYDRATION | molecular_formula 'Mg.O4S' -> 'Mg.O4S.6H2O' (#321); the label states 6 water(s) of hydration, and the recorded formula was byte-identical to the anhydrous parent CHEBI:32599's ChEBI formula ('Mg.O4S') — the mark of a value inherited from the parent rather than measured for this record. Water appended in ChEBI's own dot-separated notation. | |
| 2026-08-27T03:16:39.519304+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 20/20 -> 712/714 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-09-02T22:41:49.137449+00:00 | claude_sssom_surface_form_backfill | ADDED_SYNONYMS | Recovered 3 surface form(s) that the published SSSOM `other` carried but no curated record did, so a rebuild would have dropped them from KGX: 'Mg2SO4'; 'MgSO .7H O'; 'MgSO4 × 7 H2O'. Tokens already present on the kg-microbe ontology node were left out as redundant (#520). | |
| 2026-09-12T00:00:00+00:00 | reject_hidden_hydrate_synonym_collapses | REJECTED_HIDDEN_HYDRATE_SYNONYMS | MAPPED | Marked hidden hydrate synonym(s) as REJECTED_LABEL so this record no longer resolves sibling hydrate identities (#251): 'MgSO4 . 7H2O', 'MgSO4 . H2O', 'MgSO4 x 7 H2O (0.1% w/v)', 'MgSO4 x 7 H2O (100 mM)', 'MgSO4 x 7 H2O solution (25%)', 'MgSO4 x 7 H2O to 15.0 g).', 'MgSO4 x 7H2O', 'MgSO4 x H2O', 'MgSO4 x7 H2O', 'MgSO4 x7H2O', 'MgSO4 · 7H2O', 'MgSO4 ·7H2O', 'MgSO4 × 7 H2O'. |
| 2026-09-12T00:00:00+00:00 | fix_hydrate_local_identities | LOCALIZED_HYDRATE_IDENTITY | MAPPED | identifier CHEBI:32599 -> kgmicrobe.compound:mgso4_x_6_h2o; mapping_quality EXACT_MATCH -> NARROW_MATCH. Preserved the curated formula Mg.O4S.6H2O, cleared parent-derived chemical_properties {'cas_rn': '7487-88-9', 'data_source': 'CultureBotHT/compounds_to_cas.csv', 'retrieval_date': '2026-04-09T00:32:50.689620+00:00', 'molecular_formula': 'Mg.O4S.6H2O', 'inchi': 'InChI=1S/Mg.H2O4S/c;1-5(2,3)4/h;(H2,1,2,3,4)/q+2;/p-2', 'smiles': 'O=S(=O)([O-])[O-].[Mg+2]'}, and marked 2 parent-derived synonym(s) as REJECTED_LABEL (#652). |
| 2026-09-12T00:00:00+00:00 | fix_hydrate_local_identities | REFRESHED_HYDRATE_OCCURRENCES | MAPPED | occurrence_statistics 712/714 -> 32/32 after moving reviewed hydrate source labels off their anhydrous parent identifiers and onto their exact hydrate identities (#652). |
| 2026-09-12T00:00:00+00:00 | fix_hydrate_local_identities | ADDED_HYDRATE_FORM_SYNONYMS | MAPPED | Added MgSO4·6H2O as reviewed HYDRATE_FORM source label(s) for the local hydrate identity (#663). |
| 2026-09-12T00:00:00+00:00 | fix_hydrate_local_identities | REFRESHED_HYDRATE_OCCURRENCES | MAPPED | occurrence_statistics 32/32 -> 35/35 after moving reviewed hydrate source labels off their anhydrous parent identifiers and onto their exact hydrate identities (#652). |