Ontology mapping
- Primary identifier
-
kgmicrobe.ingredient:mono_and_disaccharides - Notes
- Imported from microbedecoder (source_id=kgmicrobe.compound:mono_and_disaccharides); no CAS-RN or CHEBI/NCIT match. Curator review needed.
Synonyms (1)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Mono- And Disaccharides | RAW_TEXT | microbedecoder |
Evidence (1)
MANUAL_CURATION
via MIM curation (#369)
Registry identity retained while the whole-record grounding is reviewed separately. Corrected prior active evidence: Monosaccharide and disaccharide are category members named by a coordinated class label, not physical constituents of a mixture.
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
- Source occurrences
- Source
- microbedecoder
- Count
- 1
- Source columns
- bergey:substrates
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-08-04T02:54:09.684805+00:00 | audit_import_ingredients[microbedecoder] | CREATED_AS_UNMAPPED | UNMAPPED | Imported from microbedecoder (source_id=kgmicrobe.compound:mono_and_disaccharides); no CAS-RN or CHEBI/NCIT match. Curator review needed. |
| 2026-08-05T00:01:30.894952+00:00 | microbedecoder-residual-dispositions LLM | FLAGGED_NEEDS_EXPERT | NEEDS_EXPERT | Not a single-compound grounding target: multi-component blend or named medium; no single ontology term grounds it -- needs decomposition into constituents. |
| 2026-08-06T00:00:00+00:00 | edison_literature_identity LLM | ANNOTATED | Edison LITERATURE (PaperQA3) identity research; report at research/ingredients/Mono-_And_Disaccharides-edison-literature.md (local artifact — research/ is gitignored, so the findings are quoted here rather than linked). Report verdict: **Recommended interpretation:** a coordinated **carbohydrate substrate-family label**, normalized as **“monosaccharides and disaccharides.”** It is not one chemical, salt/hydrate, fixed mixture, commercial formulation, buffer, extract, or named culture medium. The supplied provenance (`bergey:substrates`) is consistent with a phenotypic/substrate category rather than a formulation record. CURIEs discussed: CHEBI:35381, CHEBI:36233, CHEBI:16646. Recorded as provenance only — no grounding applied from this run. Edison's recommendations are deliberately conservative, and a plausible identifier promoted by a mechanism that never decided anything is what #203 and #263 exist to undo. Any CURIE above is a curator's to accept or reject. | |
| 2026-08-15T00:00:00+00:00 | decompose_py_media_and_ground_categories | DECOMPOSED_TO_COMPONENTS | MAPPED | UNMAPPED_0764 -> kgmicrobe.ingredient:mono_and_disaccharides (FALLBACK_REGISTRY). Decomposed into 2 constituents: the label names two ChEBI classes, so it decomposes into them rather than grounding to either. Minted under the #288 STOCK_SOLUTION convention because no ontology term denotes the blend itself. ingredient_type=DEFINED_MEDIUM. No concentrations recorded — the label states none. |
| 2026-08-15T00:00:00+00:00 | move_mapped_out_of_unmapped_collection | MOVED_TO_MAPPED_COLLECTION | Moved from unmapped_ingredients.yaml to mapped_ingredients.yaml (#370). The record was already MAPPED; it had been promoted in place by a path that does not move between collections, and reconcile_sssom reads only the mapped collection — so its mapping was curated but unpublished. | |
| 2026-08-24T00:00:00+00:00 | migrate_component_partonomy | REMOVED_NON_PARTONOMIC_COMPONENTS | #369: Monosaccharide and disaccharide are category members named by a coordinated class label, not physical constituents of a mixture. Replaced the active mapping evidence that described the false component claim; registry identity and ingredient type were not changed. |