Ontology mapping
- Primary identifier
-
CHEBI:17268 - Ontology label
- myo-inositol
- kg-microbe node
CHEBI:17268
Nutritional roles
- Role
- VITAMIN_SOURCE
- Confidence
- 0.8
- Evidence
- Reference type
- COMPUTATIONAL_PREDICTION
- Reference text
- Inferred from curated media-role name pattern
- Curator note
- Provisional role from a curated name-pattern rule; review recommended.
Synonyms (21)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Cross-references: KEGG:inost | RAW_TEXT | CultureMech | |
| Role: Growth factor; Properties: Organic compound, Defined component, Simple component | RAW_TEXT | CultureMech | |
| (1r,2R,3S,4s,5R,6S)-cyclohexane-1,2,3,4,5,6-hexol | EXACT_SYNONYM | kg_microbe | |
| 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE | EXACT_SYNONYM | kg_microbe | |
| 1,2,3,4,5,6-cyclohexanehexol | EXACT_SYNONYM | kg_microbe | |
| 1,2,3,5/4,6-cyclohexanehexol | EXACT_SYNONYM | kg_microbe | |
| 1D-myo-Inositol | EXACT_SYNONYM | kg_microbe | |
| 1L-myo-Inositol | EXACT_SYNONYM | kg_microbe | |
| Bios I | EXACT_SYNONYM | kg_microbe | |
| Cyclohexitol | EXACT_SYNONYM | kg_microbe | |
| D-myo-Inositol | EXACT_SYNONYM | kg_microbe | |
| Dambose | EXACT_SYNONYM | kg_microbe | |
| Inositol (myo-inositol) | EXACT_SYNONYM | kg_microbe | |
| Ins | EXACT_SYNONYM | kg_microbe | |
| L-myo-Inositol | EXACT_SYNONYM | kg_microbe | |
| Meat sugar | EXACT_SYNONYM | kg_microbe | |
| Myoinositol | EXACT_SYNONYM | kg_microbe | |
| cis-1,2,3,5-trans-4,6-cyclohexanehexol | EXACT_SYNONYM | kg_microbe | |
| i-inositol | EXACT_SYNONYM | kg_microbe | |
| inosite | EXACT_SYNONYM | kg_microbe | |
| m-Inositol | RAW_TEXT | MERGED_FROM_CHEBI:10642 |
Chemical properties
- Cas rn
- 87-89-8
- Data source
- PubChem API
- Retrieval date
- 2026-04-05T19:53:04.790135+00:00
- Molecular formula
- C6H12O6
- Inchi
- InChI=1S/C6H12O6/c7-1-2(8)4(10)6(12)5(11)3(1)9/h1-12H/t1-,2-,3-,4+,5-,6-
- Smiles
- O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 59
- Distinct media
- 59
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T19:53:04.790186+00:00 | fetch_cas_rn_from_pubchem | ADDED_CAS_RN | MAPPED | Added CAS-RN:87-89-8 from PubChem API via name lookup (myo-Inositol) |
| 2026-04-09T00:32:50.689620+00:00 | enrich_mim_cas_rn_batch | CAS_RN_ADDED | MAPPED | Added CAS-RN 87-89-8 from PubChem (via CHEBI:17268) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 18 synonyms from kg-microbe P4.4 enrichment: (1r,2R,3S,4s,5R,6S)-cyclohexane-1,2,3,4,5,6-hexol, 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1,2,3,4,5,6-cyclohexanehexol, 1,2,3,5/4,6-cyclohexanehexol, 1D-myo-Inositol, ... (13 more) |
| 2026-04-19T07:39:23.955331+00:00 | audit_mim_merge | MERGED_FROM_DUPLICATES | MAPPED | Absorbed 1 duplicate MIM record(s) into this one: Myo-inositol_2.yaml. Synonyms, curation_history, and occurrence counts were unioned/summed; winner selected by highest occurrence count with preferred_term readability tie-break. |
| 2026-05-01T07:35:34.910207+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:30.957644+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=C6H12O6; inchi=InChI=1S/C6H12O6/c7-1-2(8)4(10)6(12)5(11)3(1)9/h1-; smiles=O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O | |
| 2026-05-02T03:12:16.661565+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-06-03T02:06:01.745284+00:00 | infer_roles_from_name_lists | ANNOTATED | Added media role: VITAMIN_SOURCE (confidence: 0.80) | |
| 2026-06-09T05:23:46.801140+00:00 | correct_stale_ontology_labels.py | CORRECTED | ontology_label 'Myo-inositol' -> 'myo-inositol': synced to canonical CHEBI label (preferred_term 'myo-Inositol' unchanged). | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): VITAMIN_SOURCE -> nutritional_roles.VITAMIN_SOURCE | |
| 2026-08-13T00:00:00+00:00 | merge_cas_conflict_duplicates | MERGED_FROM | Absorbed 'm-Inositol' (#320), which sat on CHEBI:10642 ('scyllo-inositol'). Merged because 'm-Inositol' is myo-inositol. The record was grounded to scyllo-inositol, a different stereoisomer, by a CAS_RN_LOOKUP that its own CAS 87-89-8 contradicts — ChEBI registers that CAS against CHEBI:17268 myo-inositol. The CAS-vs-CURIE conflict #320 flagged on that record was a symptom of the duplicate, not of a bad mapping. Occurrences 31/31 + 21/21 -> 52/52. Raw label kept as a RAW_TEXT synonym. | |
| 2026-08-27T03:16:39.519364+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 52/52 -> 59/59 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] |