Ontology mapping
- Primary identifier
-
CHEBI:64243 - Ontology label
- monosodium L-glutamate
Nutritional roles
- Role
- NITROGEN_SOURCE
- Confidence
- 1.0
- Evidence
- Reference type
- DATABASE_ENTRY
- Reference text
- Imported from CultureMech pipeline
- Curator note
- Original role text: Nitrogen Source
Synonyms (3)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Role: Nitrogen source; Properties: Simple component, Organic compound, Defined component | RAW_TEXT | CultureMech | |
| (2S)-2-aminopentanedioate | EXACT_SYNONYM | kg_microbe | |
| L-glutamic acid dianion | EXACT_SYNONYM | kg_microbe |
Rejected enrichment labels (1)
Provenance-only candidates: these are not synonyms and do not resolve to this record.
| Rejected label | Disposition | Source | Occurrences |
|---|---|---|---|
| L-glutamate | REJECTED_LABEL | chebi_synonym_review |
Chemical properties
- Cas rn
- 16177-21-2
- Data source
- PubChem API (preprocessed)
- Retrieval date
- 2026-04-05T23:45:38.626218+00:00
- Molecular formula
- C5H7NO4
- Inchi
- InChI=1S/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H,7,8)(H,9,10)/p-2/t3-/m0/s1
- Smiles
- N[C@@H](CCC(=O)[O-])C(=O)[O-]
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T23:45:38.626229+00:00 | fetch_cas_rn_with_preprocessing | ADDED_CAS_RN | MAPPED | Added CAS-RN:16177-21-2 from PubChem API (preprocessed) via name preprocessing (Na-glutamate) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 2 synonyms from kg-microbe P4.4 enrichment: (2S)-2-aminopentanedioate, L-glutamic acid dianion |
| 2026-05-01T07:35:35.027523+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:31.088121+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=C5H7NO4; inchi=InChI=1S/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2; smiles=N[C@@H](CCC(=O)[O-])C(=O)[O-] | |
| 2026-05-02T03:12:16.811957+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-29T23:35:36.112052+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: NITROGEN_SOURCE (confidence: 1.00) | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): NITROGEN_SOURCE -> nutritional_roles.NITROGEN_SOURCE | |
| 2026-08-10T00:00:00+00:00 | regrade_synonym_matches | REGRADED_EXACT_TO_SYNONYM | mapping_quality EXACT_MATCH -> SYNONYM_MATCH (#317). The record's label does not equal the term's primary label 'L-glutamate(2-)'; it matches the ChEBI synonym '(2S)-2-aminopentanedioate' on CHEBI:29988. The schema defines EXACT_MATCH as a direct match to the term and SYNONYM_MATCH as a match to a known synonym, so the recorded grade overstated. ontology_id is unchanged — the term is correct. The SSSOM predicate is unaffected (both grades emit skos:exactMatch). | |
| 2026-08-10T00:00:00+00:00 | merge_salt_label_duplicates | MERGED_INTO | Merged into CHEBI:64243 'Sodium L-glutamate'; occurrences transferred. Tombstoned REJECTED, SSSOM rows dropped. Same substance under two names — the abbreviated `Na-` prefix is why the earlier merge pass missed it (#315). | |
| 2026-08-15T00:00:00+00:00 | fix_tombstone_pointers | REFRESHED_TOMBSTONE_ONTOLOGY_ID | ontology_id CHEBI:29988 -> CHEBI:64243 (#360). The merge set identifier and status but left ontology_mapping untouched, so this tombstone kept advertising a term it no longer asserts — anything indexing by ontology_id routed through it. Now agrees with the merge target 'Sodium L-glutamate'. Provenance is unaffected: what the record used to assert is in this history. | |
| 2026-09-23T06:21:57.561780+00:00 | claude LLM | REJECTED_WRONG_FORM_SYNONYMS | REJECTED | Retyped REJECTED_LABEL: 'L-glutamate' (EXACT_SYNONYM): the anion's name on the monosodium L-glutamate CHEBI:64243 tombstone (#232). The token is kept as provenance only; it must not resolve, be exported, or enter the SSSOM other column. |