Ontology mapping
- Primary identifier
-
CHEBI:53504 - Ontology label
- nickel sulfate heptahydrate
Nutritional roles
- Role
- TRACE_ELEMENT
- Confidence
- 0.8
- Evidence
- Reference type
- COMPUTATIONAL_PREDICTION
- Reference text
- Inferred from curated media-role name pattern
- Curator note
- Provisional role from a curated name-pattern rule; review recommended.
Synonyms (1)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| NiSO4・7H2O | HYDRATE_FORM | kg_microbe |
Rejected enrichment labels (5)
Provenance-only candidates: these are not synonyms and do not resolve to this record.
| Rejected label | Disposition | Source | Occurrences |
|---|---|---|---|
| NiSO4 . 6H2O | REJECTED_LABEL | kg_microbe | |
| NiSO4 x 6 H2O | REJECTED_LABEL | kg_microbe | |
| NiSO4·6H2O | REJECTED_LABEL | kg_microbe | |
| NiSO4・6H2O | REJECTED_LABEL | kg_microbe | |
| nickel(2+) sulfate | REJECTED_LABEL | chebi_synonym_review |
Chemical properties
- Data source
- CultureBotHT/compounds_to_cas.csv
- Retrieval date
- 2026-04-09T00:32:50.689620+00:00
- Molecular formula
- Ni.O4S.7H2O
- Inchi
- InChI=1S/Ni.H2O4S/c;1-5(2,3)4/h;(H2,1,2,3,4)/q+2;/p-2
- Smiles
- O=S(=O)([O-])[O-].[Ni+2]
Evidence (3)
Imported from CultureMech pipeline, quality=DIRECT_MATCH
molecular_formula 'Ni.O4S' -> 'Ni.O4S.7H2O'. The recorded value described the anhydrous salt while the label names a hydrate, understating the mass by 18 g/mol per water. Corrected because the label states 7 water(s) of hydration, and the recorded formula was byte-identical to the anhydrous parent CHEBI:53001's ChEBI formula ('Ni.O4S') — the mark of a value inherited from the parent rather than measured for this record. Water appended in ChEBI's own dot-separated notation.
Promoted from CHEBI:53001 ('nickel sulfate') to the specific hydrate term CHEBI:53504 ('nickel sulfate heptahydrate') — MAPPING_SEMANTICS §3 step 1: the label names a hydrate, ChEBI has the term, so nothing needs minting and no closeMatch question arises. The previous term carried no water while the label states it. Found by cross-checking CultureBotAI/CultureMech#272 (#374/#334).
Occurrence statistics
- Total occurrences
- 9
- Distinct media
- 9
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-09T00:32:50.689620+00:00 | enrich_mim_cas_rn_batch | CAS_RN_ADDED | MAPPED | Added CAS-RN 10101-97-0 from CultureBotHT/compounds_to_cas.csv |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 5 synonyms from kg-microbe P4.4 enrichment: NiSO4 . 6H2O, NiSO4 x 6 H2O, NiSO4·6H2O, NiSO4・6H2O, NiSO4・7H2O |
| 2026-05-01T07:35:35.574359+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:31.675666+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=Ni.O4S; inchi=InChI=1S/Ni.H2O4S/c;1-5(2,3)4/h;(H2,1,2,3,4)/q+2;/; smiles=O=S(=O)([O-])[O-].[Ni+2] | |
| 2026-05-02T03:12:17.464768+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-06-02T07:05:13.392094+00:00 | infer_roles_from_name_lists | ANNOTATED | Added media role: MINERAL (confidence: 0.80) | |
| 2026-06-09T05:23:46.813483+00:00 | correct_stale_ontology_labels.py | CORRECTED | ontology_label 'NiSO4 x 7 H2O' -> 'nickel sulfate': synced to canonical CHEBI label (preferred_term 'NiSO4 x 7 H2O' unchanged). | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): MINERAL -> nutritional_roles.TRACE_ELEMENT | |
| 2026-08-13T00:00:00+00:00 | fix_scrambled_hydrate_cas | WITHDREW_WRONG_CAS | cas_rn '10101-97-0' removed (#320/#334). It denotes nickel sulfate hexahydrate, which contradicts the hydration state this record's label states — the #334 scrambling, where one CAS is applied across a salt family regardless of hydration. No verified replacement is available: the record's term CHEBI:53001 is generic nickel sulfate, so its xref 7786-81-4 is the anhydrous CAS — wrong for a heptahydrate. Cleared rather than substituted, because swapping in a second wrong number would read as a correction while still publishing a false identifier. | |
| 2026-08-13T00:00:00+00:00 | add_water_of_hydration | ADDED_WATER_OF_HYDRATION | molecular_formula 'Ni.O4S' -> 'Ni.O4S.7H2O' (#321); the label states 7 water(s) of hydration, and the recorded formula was byte-identical to the anhydrous parent CHEBI:53001's ChEBI formula ('Ni.O4S') — the mark of a value inherited from the parent rather than measured for this record. Water appended in ChEBI's own dot-separated notation. | |
| 2026-08-15T00:00:00+00:00 | fix_hydrate_terms_and_twins | PROMOTED_TO_SPECIFIC_HYDRATE | identifier/ontology_id CHEBI:53001 -> CHEBI:53504; Promoted from CHEBI:53001 ('nickel sulfate') to the specific hydrate term CHEBI:53504 ('nickel sulfate heptahydrate') — MAPPING_SEMANTICS §3 step 1: the label names a hydrate, ChEBI has the term, so nothing needs minting and no closeMatch question arises. The previous term carried no water while the label states it. Found by cross-checking CultureBotAI/CultureMech#272 (#374/#334). | |
| 2026-08-27T03:16:39.519628+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 6/6 -> 9/9 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-09-12T00:00:00+00:00 | reject_hidden_hydrate_synonym_collapses | REJECTED_HIDDEN_HYDRATE_SYNONYMS | MAPPED | Marked hidden hydrate synonym(s) as REJECTED_LABEL so this record no longer resolves sibling hydrate identities (#251): 'NiSO4 . 6H2O', 'NiSO4 x 6 H2O', 'NiSO4·6H2O', 'NiSO4・6H2O'. |
| 2026-09-22T20:41:14.285965+00:00 | claude LLM | REJECTED_PARENT_NAME_SYNONYMS | Retyped names of the parent compound or of a different hydrate as provenance-only REJECTED_LABEL, because this record is a distinct salt, hydrate or tombstone form and the label index resolved the parent's name here (#232): 'nickel(2+) sulfate'. Preserved original text and source metadata. No identity, mapping, role, or remaining-synonym claim was adjudicated. |