Ontology mapping
- Primary identifier
-
CHEBI:219652 - Ontology label
- Nocamycin
Physicochemical roles
- Role
- SELECTIVE_AGENT
- Confidence
- 0.8
- Evidence
- Reference type
- COMPUTATIONAL_PREDICTION
- Reference text
- Inferred from curated media-role name pattern
- Curator note
- Provisional role from a curated name-pattern rule; review recommended.
Synonyms (1)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| methyl 2-[3-[(3E,5E)-7-(2,4-dioxopyrrolidin-3-ylidene)-7-hydroxy-4-methylhepta-3,5-dien-2-yl]-1,4-dimethyl-6-oxospiro[2,9-dioxabicyclo[3.3.1]nonane-8,3'-oxirane]-2'-yl]propanoate | EXACT_SYNONYM | chebi_synonym_review |
Rejected enrichment labels (1)
Provenance-only candidates: these are not synonyms and do not resolve to this record.
| Rejected label | Disposition | Source | Occurrences |
|---|---|---|---|
| produces: nocamycin | REJECTED_LABEL | sssom_other_backfill |
Chemical properties
- Molecular formula
- C26H33NO9
- Inchi
- InChI=1S/C26H33NO9/c1-12(7-8-16(28)19-18(30)11-27-23(19)31)9-13(2)20-14(3)21-17(29)10-26(25(5,34-20)35-21)22(36-26)15(4)24(32)33-6/h7-9,13-15,20-22,28H,10-11H2,1-6H3,(H,27,31)/b8-7+,12-9+,19-16?
- Smiles
- COC(=O)C(C)C1OC12CC(=O)C1OC2(C)OC(C(C)/C=C(C)/C=C/C(O)=C2C(=O)CNC2=O)C1C
- Data source
- CHEBI sqlite (oaklib)
Evidence (1)
LEXICAL_MATCH
via kgmicrobe.compound:nocamycin
Auto-curated from UNMAPPED_PENDING_CURATION queue; OLS exact-label match
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-04-19T06:10:55.017713+00:00 | audit_propose_chebi_for_unmapped | CREATED_FROM_UNMAPPED_QUEUE | MAPPED | Created new ingredient from kgmicrobe.compound:nocamycin with auto-curated CHEBI CHEBI:219652 (Nocamycin) |
| 2026-05-01T07:35:35.602243+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:31.706679+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=C26H33NO9; inchi=InChI=1S/C26H33NO9/c1-12(7-8-16(28)19-18(30)11-27-; smiles=COC(=O)C(C)C1OC12CC(=O)C1OC2(C)OC(C(C)/C=C(C)/C=C/ | |
| 2026-05-02T03:12:17.502686+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-06-02T07:05:13.392143+00:00 | infer_roles_from_name_lists | ANNOTATED | Added media role: SELECTIVE_AGENT (confidence: 0.80) | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): SELECTIVE_AGENT -> physicochemical_roles.SELECTIVE_AGENT | |
| 2026-09-02T17:40:44.716277+00:00 | claude_sssom_surface_form_backfill | ADDED_SYNONYMS | Recovered 1 surface form(s) that the published SSSOM `other` carried but no curated record did, so a rebuild would have dropped them from KGX: 'produces: nocamycin'. Tokens already present on the kg-microbe ontology node were left out as redundant (#520). | |
| 2026-09-22T06:14:49.563933+00:00 | claude LLM | REJECTED_TRAIT_SYNONYMS | Retyped activity/assay phrases as provenance-only REJECTED_LABEL because they describe a process or organism trait, not an ingredient name (#703): 'produces: nocamycin'. Preserved original text and source metadata. No identity, mapping, role, or remaining-synonym claim was adjudicated. |