Ontology mapping
- Primary identifier
-
CHEBI:16454 - Ontology label
- pantothenate
Nutritional roles
- Role
- VITAMIN_SOURCE
- Confidence
- 1.0
- Evidence
- Reference type
- DATABASE_ENTRY
- Reference text
- Imported from CultureMech pipeline
- Curator note
- Original role text: Vitamin Source
Synonyms (5)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Cross-references: KEGG:pnto-R | RAW_TEXT | CultureMech | |
| Role: Vitamin; Properties: Defined component, Simple component, Organic compound | RAW_TEXT | CultureMech | |
| Role: Vitamin; Properties: Organic compound, Defined component, Simple component | RAW_TEXT | CultureMech | |
| 3-(2,4-dihydroxy-3,3-dimethylbutanamido)propanoate | EXACT_SYNONYM | kg_microbe | |
| N-(2,4-dihydroxy-3,3-dimethylbutanoyl)-beta-alaninate | EXACT_SYNONYM | kg_microbe |
Chemical properties
- Cas rn
- 20938-62-9
- Data source
- PubChem API
- Retrieval date
- 2026-04-05T19:53:36.892289+00:00
- Molecular formula
- C9H16NO5
- Inchi
- InChI=1S/C9H17NO5/c1-9(2,5-11)7(14)8(15)10-4-3-6(12)13/h7,11,14H,3-5H2,1-2H3,(H,10,15)(H,12,13)/p-1
- Smiles
- CC(C)(CO)C(O)C(=O)NCCC(=O)[O-]
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 36
- Distinct media
- 36
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T19:53:36.892310+00:00 | fetch_cas_rn_from_pubchem | ADDED_CAS_RN | MAPPED | Added CAS-RN:20938-62-9 from PubChem API via name lookup (Pantothenate) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 2 synonyms from kg-microbe P4.4 enrichment: 3-(2,4-dihydroxy-3,3-dimethylbutanamido)propanoate, N-(2,4-dihydroxy-3,3-dimethylbutanoyl)-beta-alaninate |
| 2026-05-01T07:35:35.696043+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:31.805760+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=C9H16NO5; inchi=InChI=1S/C9H17NO5/c1-9(2,5-11)7(14)8(15)10-4-3-6(1; smiles=CC(C)(CO)C(O)C(=O)NCCC(=O)[O-] | |
| 2026-05-02T03:12:17.628984+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-29T23:35:36.112547+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: VITAMIN_SOURCE (confidence: 1.00) | |
| 2026-06-09T05:23:46.817080+00:00 | correct_stale_ontology_labels.py | CORRECTED | ontology_label 'Pantothenate' -> 'pantothenate': synced to canonical CHEBI label (preferred_term 'Pantothenate' unchanged). | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): VITAMIN_SOURCE -> nutritional_roles.VITAMIN_SOURCE | |
| 2026-08-27T03:16:39.519663+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 31/31 -> 36/36 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] |