Ontology mapping
- Primary identifier
-
MICRO:0000180 - Ontology label
- proteose peptone
- Notes
- CultureMech placeholder_id: 3; absorbed Peptic digest of animal tissue source surface on 2026-05-11.
Nutritional roles
- Role
- PROTEIN_SOURCE
- Confidence
- 0.8
- Evidence
- Reference type
- COMPUTATIONAL_PREDICTION
- Reference text
- Inferred from curated media-role name pattern
- Curator note
- Provisional role from a curated name-pattern rule; review recommended.
Synonyms (18)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Proteose Peptone(BD 211684) | RAW_TEXT | CultureMech | |
| Proteose peptone | EXACT_SYNONYM | manual | |
| Proteose peptone no. 3 | RELATED_SYNONYM | manual | |
| Proteose peptone No. 3 (BD-Difco) | CATALOG_VARIANT | manual | |
| Bacto Proteose Peptone No. 3 (Difco) | CATALOG_VARIANT | manual | |
| Proteose Peptone | EXACT_SYNONYM | manual | |
| Proteose peptone (BD-Difco) | CATALOG_VARIANT | manual | |
| Proteose Peptone | RELATED_SYNONYM | manual | |
| Proteose Peptone (Difco no. 3) | CATALOG_VARIANT | manual | |
| Proteose peptone (Difco) | CATALOG_VARIANT | manual | |
| Proteose peptone (BD Difco) | CATALOG_VARIANT | manual | |
| Proteose Peptone No. 3 | RELATED_SYNONYM | manual | |
| Bacto Proteose Peptone No.3 (Difco) | CATALOG_VARIANT | manual | |
| Proteose peptone no.3 (Difco) | CATALOG_VARIANT | manual | |
| Proteose peptone No. 3 (BD--Difco) | CATALOG_VARIANT | manual | |
| Proteose peptone (BD--Difco) | CATALOG_VARIANT | manual | |
| Peptic digest of animal tissue | RAW_TEXT | merged_from_unmapped_duplicate_review_2026_05_11 | |
| Proteose peptone (BD Difico) | CATALOG_VARIANT | culturemech:output/ingredient_occurrences.tsv |
Chemical properties
- Cas rn
- 91079-38-8
- Data source
- CultureBotHT compounds_to_cas.csv
- Retrieval date
- 2026-04-05T21:48:46.047943+00:00
Evidence (2)
CURATOR_JUDGMENT
via cbclaw_foodon_promotion
Commercial food mixture - FOODON is correct parent ontology. Proteose peptone is a pancreatic/peptic digest of animal tissue; mapped to FOODON parent 'animal protein (hydrolyzed)'. No exact FOODON term exists. CLOSE_MATCH.
CURATOR_JUDGMENT
via manual review of MICRO ontology coverage
MICRO has the exact label; FOODON:03315718 was a parent.
Occurrence statistics
- Total occurrences
- 571
- Distinct media
- 563
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | UNMAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T21:48:46.047951+00:00 | fetch_cas_rn_from_culturebot_csv | ADDED_CAS_RN | UNMAPPED | Added CAS-RN:91079-38-8 from CultureBotHT compounds_to_cas.csv (matched: Proteose Peptone) |
| 2026-04-18T04:19:36+00:00 | foodon_promotion_cbclaw LLM | MAPPED | MAPPED | Promoted commercial food-mixture surface forms with FOODON:03315718 (animal protein, hydrolyzed). |
| 2026-05-01T07:35:35.921382+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=UNDEFINED_MIXTURE (name matches complex pattern 'Peptone') | |
| 2026-05-02T01:19:04.361658+00:00 | manual_micro_specificity_pass | UPGRADE_FOODON_PARENT_TO_MICRO_SPECIFIC | FOODON:03315718 → MICRO:0000180 (more specific MICRO term) | |
| 2026-05-02T03:12:17.922772+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=UNDEFINED_MIXTURE (name matches complex pattern 'Peptone') | |
| 2026-05-11T07:50:00Z | mediaingredientmech-agentic-curation LLM | ABSORBED_UNMAPPED_DUPLICATE | MAPPED | Absorbed unmapped record Peptic_Digest_Of_Animal_Tissue.yaml (UNMAPPED_0242); OAK/OLS audit supports MICRO:0000180 proteose peptone as the exact term for peptic digest of animal tissue. |
| 2026-06-03T02:06:01.748330+00:00 | infer_roles_from_name_lists | ANNOTATED | Added media role: PROTEIN_SOURCE (confidence: 0.80) | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): PROTEIN_SOURCE -> nutritional_roles.PROTEIN_SOURCE | |
| 2026-08-27T03:16:39.519750+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 5/5 -> 563/571 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-08-30T04:48:06.233536+00:00 | claude_culturemech_alias_backfill | ADDED_SYNONYMS | Added 1 CultureMech recipe surface form(s) that folded onto this record's published label but were absent from MIM's label index, so CultureMech could not resolve them: 'Proteose peptone (BD Difico)' (x1 CultureMech mentions). Source: culturemech:output/ingredient_occurrences.tsv. | |
| 2026-09-10T12:00:00+00:00 | fix_micro_malformed_iris LLM | REMOVED_SYNONYMS | Removed Proteose peptone No. 2 surface forms from the generic Proteose Peptone record after splitting Proteose peptone no. 2 to a local kgmicrobe.ingredient identity anchored to the well-formed MICRO:0000180 parent. See #137. |