Ontology mapping
- Primary identifier
-
CHEBI:16634 - Ontology label
- raffinose
- kg-microbe node
CHEBI:16634
Nutritional roles
- Role
- CARBON_SOURCE
- Confidence
- 1.0
- Evidence
- Reference type
- DATABASE_ENTRY
- Reference text
- Imported from CultureMech pipeline
- Curator note
- Original role text: Carbon Source
Synonyms (11)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Role: Carbon source; Properties: Organic compound, Simple component, Defined component | RAW_TEXT | CultureMech | |
| 6G-alpha-D-galactosylsucrose | EXACT_SYNONYM | kg_microbe | |
| D-raffinose (raffinose) | EXACT_SYNONYM | kg_microbe | |
| Gossypose | EXACT_SYNONYM | kg_microbe | |
| Melitose | EXACT_SYNONYM | kg_microbe | |
| Melitriose | EXACT_SYNONYM | kg_microbe | |
| alpha-D-Galp-(1->6)-alpha-D-Glcp-(1<->2)-beta-D-Fruf | EXACT_SYNONYM | kg_microbe | |
| alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranosyl beta-D-fructofuranoside | EXACT_SYNONYM | kg_microbe | |
| beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside | EXACT_SYNONYM | kg_microbe | |
| rafinose | EXACT_SYNONYM | kg_microbe | |
| raflinose | EXACT_SYNONYM | kg_microbe |
Chemical properties
- Cas rn
- 512-69-6
- Data source
- PubChem API
- Retrieval date
- 2026-04-05T19:53:47.677357+00:00
- Molecular formula
- C18H32O16
- Inchi
- InChI=1S/C18H32O16/c19-1-5-8(22)11(25)13(27)16(31-5)30-3-7-9(23)12(26)14(28)17(32-7)34-18(4-21)15(29)10(24)6(2-20)33-18/h5-17,19-29H,1-4H2/t5-,6-,7-,8+,9-,10-,11+,12+,13-,14-,15+,16+,17-,18+/m1/s1
- Smiles
- OC[C@H]1O[C@H](OC[C@H]2O[C@H](O[C@]3(CO)O[C@H](CO)[C@@H](O)[C@@H]3O)[C@H](O)[C@@H](O)[C@@H]2O)[C@H](O)[C@@H](O)[C@H]1O
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 8
- Distinct media
- 8
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T19:53:47.677408+00:00 | fetch_cas_rn_from_pubchem | ADDED_CAS_RN | MAPPED | Added CAS-RN:512-69-6 from PubChem API via name lookup (Raffinose) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 10 synonyms from kg-microbe P4.4 enrichment: 6G-alpha-D-galactosylsucrose, D-raffinose (raffinose), Gossypose, Melitose, Melitriose, ... (5 more) |
| 2026-05-01T07:35:36.037478+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:32.130540+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=C18H32O16; inchi=InChI=1S/C18H32O16/c19-1-5-8(22)11(25)13(27)16(31-; smiles=OC[C@H]1O[C@H](OC[C@H]2O[C@H](O[C@]3(CO)O[C@H](CO) | |
| 2026-05-02T03:12:18.073127+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-29T23:35:36.112721+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: CARBON_SOURCE (confidence: 1.00) | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): CARBON_SOURCE -> nutritional_roles.CARBON_SOURCE | |
| 2026-08-27T03:16:39.519797+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 6/6 -> 8/8 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] |