Ontology mapping
- Primary identifier
-
CHEBI:53311 - Ontology label
- sodium alginate
Physicochemical roles
- Role
- SOLIDIFYING_AGENT
- Confidence
- 1.0
- Evidence
- Reference type
- DATABASE_ENTRY
- Reference text
- Imported from CultureMech pipeline
- Curator note
- Original role text: Solidifying Agent
Synonyms (7)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Role: Solidifying component; Properties: Defined component, Simple component, Organic compound | RAW_TEXT | CultureMech | |
| Role: Solidifying component; Properties: Simple component, Organic compound, Defined component | RAW_TEXT | CultureMech | |
| Algiline | EXACT_SYNONYM | kg_microbe | |
| Algin | EXACT_SYNONYM | kg_microbe | |
| Arcrane | EXACT_SYNONYM | kg_microbe | |
| Ascophyllum | EXACT_SYNONYM | kg_microbe | |
| Sodium polymannuronate | EXACT_SYNONYM | kg_microbe |
Chemical properties
- Cas rn
- 9005-38-3
- Data source
- CultureBotHT compounds_to_cas.csv
- Retrieval date
- 2026-04-05T21:48:45.722288+00:00
- Molecular formula
- (C6H7O6)n.H2NaO
- Inchi
- InChI=1S/C6H10O7.Na/c7-1-2(8)4(5(10)11)13-6(12)3(1)9;/h1-4,6-9,12H,(H,10,11);/q;+1/p-1/t1-,2-,3-,4?,6+;/m0./s1
- Smiles
- [H]O[C@@H]1C(C(=O)[O-])O[C@@H](O)[C@@H](O)[C@H]1O.[Na+]
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 4
- Distinct media
- 4
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T21:48:45.722290+00:00 | fetch_cas_rn_from_culturebot_csv | ADDED_CAS_RN | MAPPED | Added CAS-RN:9005-38-3 from CultureBotHT compounds_to_cas.csv (matched: Sodium alginate) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 5 synonyms from kg-microbe P4.4 enrichment: Algiline, Algin, Arcrane, Ascophyllum, Sodium polymannuronate |
| 2026-05-01T07:35:36.211988+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:32.300050+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=(C6H7O6)n.H2NaO; inchi=InChI=1S/C6H10O7.Na/c7-1-2(8)4(5(10)11)13-6(12)3(1; smiles=[H]O[C@@H]1C(C(=O)[O-])O[C@@H](O)[C@@H](O)[C@H]1O. | |
| 2026-05-02T03:12:18.312015+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-29T23:35:36.112801+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: SOLIDIFYING_AGENT (confidence: 1.00) | |
| 2026-06-09T05:23:46.832708+00:00 | correct_stale_ontology_labels.py | CORRECTED | ontology_label 'Sodium alginate' -> 'sodium alginate': synced to canonical CHEBI label (preferred_term 'Sodium alginate' unchanged). | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): SOLIDIFYING_AGENT -> physicochemical_roles.SOLIDIFYING_AGENT | |
| 2026-08-27T03:16:39.519828+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 3/3 -> 4/4 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] |