Ontology mapping
- Primary identifier
-
kgmicrobe.compound:tetramethyl_ammonium - Ontology term
-
CHEBI:35273— quaternary ammonium salt - Ontology label
- quaternary ammonium salt
- kg-microbe node
kgmicrobe.compound:tetramethyl_ammonium
Synonyms (2)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Role: Nutrient source; Properties: Inorganic compound, Defined component, Simple component | RAW_TEXT | CultureMech | |
| Role: Nutrient source; Properties: Defined component, Inorganic compound, Simple component | RAW_TEXT | CultureMech |
Rejected enrichment labels (4)
Provenance-only candidates: these are not synonyms and do not resolve to this record.
| Rejected label | Disposition | Source | Occurrences |
|---|---|---|---|
| N,N,N-trimethylmethanaminium | REJECTED_LABEL | kg_microbe | |
| TETRAMETHYLAMMONIUM ION | REJECTED_LABEL | kg_microbe | |
| tetramethylammonium | REJECTED_LABEL | kg_microbe | |
| tetramethylazanium | REJECTED_LABEL | kg_microbe |
Evidence (2)
DATABASE_MATCH
via CultureMech
SUPERSEDED (#315): describes the bare ion identity, not the complete salt or ion pair. Original note follows. Imported from CultureMech pipeline, quality=DIRECT_MATCH
CURATOR_JUDGMENT
via MIM curation (#315)
The culture-media surface form names tetramethyl ammonium as a supplied ingredient; CHEBI:46020 denotes only the cation, which cannot be supplied as a standalone neutral compound. CHEBI:35273 is the nearest verified whole-substance salt parent. No exact local ChEBI term for 'Tetramethyl ammonium' was found, so MAPPING_SEMANTICS.md Section 3 uses a kgmicrobe.compound identity with the nearest whole-substance ChEBI parent.
Occurrence statistics
- Total occurrences
- 4
- Distinct media
- 4
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-09T00:32:50.689620+00:00 | enrich_mim_cas_rn_batch | CAS_RN_ADDED | MAPPED | Added CAS-RN 51-92-3 from PubChem (via CHEBI:46020) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 4 synonyms from kg-microbe P4.4 enrichment: N,N,N-trimethylmethanaminium, TETRAMETHYLAMMONIUM ION, tetramethylammonium, tetramethylazanium |
| 2026-04-19T07:39:23.955331+00:00 | audit_mim_merge | MERGED_FROM_DUPLICATES | MAPPED | Absorbed 1 duplicate MIM record(s) into this one: Tetramethyl_Ammonium_2.yaml. Synonyms, curation_history, and occurrence counts were unioned/summed; winner selected by highest occurrence count with preferred_term readability tie-break. |
| 2026-05-01T07:35:36.573852+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:32.644224+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=C4H12N; inchi=InChI=1S/C4H12N/c1-5(2,3)4/h1-4H3/q+1; smiles=C[N+](C)(C)C | |
| 2026-05-02T03:12:18.791139+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-08-27T03:16:39.519949+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 3/3 -> 4/4 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] | |
| 2026-09-11T06:31:23.789310+00:00 | fix_salt_ion_identity_overclaims | REGROUNDED_ION_OVERCLAIM | MAPPED | identifier CHEBI:46020 -> kgmicrobe.compound:tetramethyl_ammonium; mapping_quality -> NARROW_MATCH to CHEBI:35273 ('quaternary ammonium salt'). Cleared chemical_properties because they described the tetramethylammonium cation only, marked 4 bare-ion synonym(s) as REJECTED_LABEL, and kept the complete salt or ion-pair identity distinct (#315). |