Ontology mapping
- Primary identifier
-
MICRO:0000175 - Ontology label
- Trypticase peptone
Nutritional roles
- Role
- PROTEIN_SOURCE
- Confidence
- 0.8
- Evidence
- Reference type
- COMPUTATIONAL_PREDICTION
- Reference text
- Inferred from curated media-role name pattern
- Curator note
- Provisional role from a curated name-pattern rule; review recommended.
Synonyms (2)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Properties: Undefined component | RAW_TEXT | CultureMech | |
| trypticase | EXACT | manual |
Evidence (2)
MANUAL_CURATION
via cbclaw_review_fix
[HISTORICAL — superseded by the MICRO:0000175 remap below] Corrected from CHEBI:78018 (dodecylphosphocholine — a detergent, not a peptone). Trypticase (BD BBL) is a pancreatic digest of casein. Mapped to the same FOODON parent used by Tryptone/Casein_Peptone; dropped wrong CAS-RN 53949-18-1 which belonged to dodecylphosphocholine.
CURATOR_JUDGMENT
via remap_peptones_to_micro
Re-mapped from the coarse FOODON:03315719 (mammalian milk protein, hydrolyzed) to the precise MICRO term MICRO:0000175 (Trypticase peptone).
Occurrence statistics
- Total occurrences
- 785
- Distinct media
- 785
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-17T12:00:00+00:00 | cbclaw_review_fix LLM | REMAPPED | MAPPED | Remapped CHEBI:78018 (dodecylphosphocholine) → FOODON:03315719 (mammalian milk protein, hydrolyzed). Removed wrong CAS-RN 53949-18-1. |
| 2026-05-01T07:35:36.756292+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=UNDEFINED_MIXTURE (FOODON primary (food/biological)) | |
| 2026-05-02T03:12:19.045873+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=UNDEFINED_MIXTURE (FOODON primary (food/biological)) | |
| 2026-06-03T02:06:01.753173+00:00 | infer_roles_from_name_lists | ANNOTATED | Added media role: PROTEIN_SOURCE (confidence: 0.80) | |
| 2026-06-03T07:11:13.659941+00:00 | remap_peptones_to_micro | CORRECTED | identifier FOODON:03315719 -> MICRO:0000175: disambiguated casein-peptone product from the shared coarse FOODON term to its precise MICRO term. | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): PROTEIN_SOURCE -> nutritional_roles.PROTEIN_SOURCE | |
| 2026-08-27T03:16:39.520021+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 50/76 -> 785/785 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] |