Ontology mapping
- Primary identifier
-
kgmicrobe.ingredient:tryptone_yeast_beef_tyb - Notes
- Imported from microbedecoder (source_id=kgmicrobe.trait:tryptone_yeast_beef_tyb); no CAS-RN or CHEBI/NCIT match. Curator review needed.
Synonyms (1)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Tryptone/yeast/beef (tyb) | RAW_TEXT | microbedecoder |
Evidence (1)
MANUAL_CURATION
via MIM curation (#213/#308)
Decomposed into 3 constituents: slash-separated constituents, with the parenthesised `(tyb)` confirming the reading. Minted under the #288 STOCK_SOLUTION convention because no ontology term denotes the blend itself. ingredient_type=UNDEFINED_MIXTURE. No concentrations recorded — the label states none.
Material components
- Method
- LABEL_ENUMERATION
- Completeness
- COMPLETE
| Component | Identifier | Scope | Concentration |
|---|---|---|---|
| tryptone |
MICRO:0000182
|
MIM_CATALOG | not stated |
| yeast extract |
FOODON:03315426
|
MIM_CATALOG | not stated |
| beef extract |
FOODON:03302088
|
MIM_CATALOG | not stated |
Decomposition evidence
SOURCE_LABEL
microbedecoder
— Tryptone/yeast/beef (tyb) The source label explicitly names every retained top-level part.
This is an ingredient/mixture has-part assertion, not an identity mapping, variant hierarchy, or complete culturing recipe.
Occurrence statistics
- Total occurrences
- 0
- Distinct media
- 0
- Source occurrences
- Source
- microbedecoder
- Count
- 1
- Source columns
- BacDive_Metabolite_utilization
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-08-04T02:54:09.684805+00:00 | audit_import_ingredients[microbedecoder] | CREATED_AS_UNMAPPED | UNMAPPED | Imported from microbedecoder (source_id=kgmicrobe.trait:tryptone_yeast_beef_tyb); no CAS-RN or CHEBI/NCIT match. Curator review needed. |
| 2026-08-05T00:01:30.894952+00:00 | microbedecoder-residual-dispositions LLM | FLAGGED_NEEDS_EXPERT | NEEDS_EXPERT | Not a single-compound grounding target: multi-component blend or named medium; no single ontology term grounds it -- needs decomposition into constituents. |
| 2026-08-15T00:00:00+00:00 | decompose_py_media_and_ground_categories | DECOMPOSED_TO_COMPONENTS | MAPPED | UNMAPPED_0849 -> kgmicrobe.ingredient:tryptone_yeast_beef_tyb (FALLBACK_REGISTRY). Decomposed into 3 constituents: slash-separated constituents, with the parenthesised `(tyb)` confirming the reading. Minted under the #288 STOCK_SOLUTION convention because no ontology term denotes the blend itself. ingredient_type=UNDEFINED_MIXTURE. No concentrations recorded — the label states none. |
| 2026-08-15T00:00:00+00:00 | move_mapped_out_of_unmapped_collection | MOVED_TO_MAPPED_COLLECTION | Moved from unmapped_ingredients.yaml to mapped_ingredients.yaml (#370). The record was already MAPPED; it had been promoted in place by a path that does not move between collections, and reconcile_sssom reads only the mapped collection — so its mapping was curated but unpublished. | |
| 2026-08-24T00:00:00+00:00 | migrate_component_partonomy | TYPED_COMPONENT_PARTONOMY | #369: added method/evidence/completeness and explicit reference scope to 3 existing component(s) (MIM_CATALOG); constituent names, identifiers, and concentrations were not changed. |