Ontology mapping
- Primary identifier
-
CHEBI:17418 - Ontology label
- valeric acid
- kg-microbe node
CHEBI:17418
Nutritional roles
- Role
- CARBON_SOURCE
- Confidence
- 1.0
- Evidence
- Reference type
- DATABASE_ENTRY
- Reference text
- Imported from CultureMech pipeline
- Curator note
- Original role text: Carbon Source
Synonyms (16)
| Synonym | Type | Source | Occurrences |
|---|---|---|---|
| Role: Carbon source; Properties: Defined component, Simple component, Organic compound | RAW_TEXT | CultureMech | |
| Role: Carbon source; Properties: Organic compound, Defined component, Simple component | RAW_TEXT | CultureMech | |
| Role: Carbon source; Properties: Organic compound, Simple component, Defined component | RAW_TEXT | CultureMech | |
| 1-butanecarboxylic acid | EXACT_SYNONYM | kg_microbe | |
| CH3-[CH2]3-COOH | EXACT_SYNONYM | kg_microbe | |
| PENTANOIC ACID | EXACT_SYNONYM | kg_microbe | |
| Valerianic acid | EXACT_SYNONYM | kg_microbe | |
| Valeriansaeure | EXACT_SYNONYM | kg_microbe | |
| n-BuCOOH | EXACT_SYNONYM | kg_microbe | |
| n-Pentanoate | EXACT_SYNONYM | kg_microbe | |
| n-Valeric acid | EXACT_SYNONYM | kg_microbe | |
| n-pentanoic acid | EXACT_SYNONYM | kg_microbe | |
| pentoic acid | EXACT_SYNONYM | kg_microbe | |
| propylacetic acid | EXACT_SYNONYM | kg_microbe | |
| valeric acid, normal | EXACT_SYNONYM | kg_microbe | |
| Pentanoate | EXACT_SYNONYM | chebi_synonym_review |
Chemical properties
- Cas rn
- 109-52-4
- Data source
- CultureBotHT compounds_to_cas.csv
- Retrieval date
- 2026-04-05T21:48:45.940815+00:00
- Molecular formula
- C5H10O2
- Inchi
- InChI=1S/C5H10O2/c1-2-3-4-5(6)7/h2-4H2,1H3,(H,6,7)
- Smiles
- CCCCC(=O)O
Evidence (1)
DATABASE_MATCH
via CultureMech
Imported from CultureMech pipeline, quality=DIRECT_MATCH
Occurrence statistics
- Total occurrences
- 113
- Distinct media
- 113
Curation history
| Timestamp | Curator | Action | New status | Changes |
|---|---|---|---|---|
| 2026-03-09T06:54:18.022301+00:00 | import_from_culturemech | IMPORTED | MAPPED | Initial import from CultureMech pipeline |
| 2026-04-05T19:53:07.709342+00:00 | fetch_cas_rn_from_pubchem | ADDED_CAS_RN | MAPPED | Added CAS-RN:109-52-4 from PubChem API via name lookup (n-Valeric acid) |
| 2026-04-05T21:48:45.940819+00:00 | fetch_cas_rn_from_culturebot_csv | ADDED_CAS_RN | MAPPED | Added CAS-RN:109-52-4 from CultureBotHT compounds_to_cas.csv (matched: Valeric acid) |
| 2026-04-18T00:00:00+00:00 | cbclaw_kg_microbe_sweep LLM | ADDED_SYNONYMS | MAPPED | Added 12 synonyms from kg-microbe P4.4 enrichment: 1-butanecarboxylic acid, CH3-[CH2]3-COOH, PENTANOIC ACID, Valerianic acid, Valeriansaeure, ... (7 more) |
| 2026-04-19T07:39:23.955331+00:00 | audit_mim_merge | MERGED_FROM_DUPLICATES | MAPPED | Absorbed 1 duplicate MIM record(s) into this one: N-valeric_Acid.yaml. Synonyms, curation_history, and occurrence counts were unioned/summed; winner selected by highest occurrence count with preferred_term readability tie-break. |
| 2026-05-01T07:35:36.829205+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (CHEBI primary) | |
| 2026-05-01T08:08:32.915786+00:00 | auto_classify_ingredient_type | AUTO_BACKFILL_CHEBI_CHEMISTRY | molecular_formula=C5H10O2; inchi=InChI=1S/C5H10O2/c1-2-3-4-5(6)7/h2-4H2,1H3,(H,6,7); smiles=CCCCC(=O)O | |
| 2026-05-02T03:12:19.149385+00:00 | auto_classify_ingredient_type | AUTO_CLASSIFY_INGREDIENT_TYPE | set ingredient_type=SINGLE_INGREDIENT (chemical structure populated (molecular_formula)) | |
| 2026-05-29T23:35:36.113316+00:00 | extract_roles_from_synonyms | ANNOTATED | Added media role: CARBON_SOURCE (confidence: 1.00) | |
| 2026-06-09T05:23:46.848548+00:00 | correct_stale_ontology_labels.py | CORRECTED | ontology_label 'Valeric acid' -> 'valeric acid': synced to canonical CHEBI label (preferred_term 'Valeric acid' unchanged). | |
| 2026-07-20T00:00:00+00:00 | migrate_media_roles_to_facets | ANNOTATED | Migrated legacy media_roles to role facets (#128): CARBON_SOURCE -> nutritional_roles.CARBON_SOURCE | |
| 2026-08-27T03:16:39.520058+00:00 | refresh_occurrence_statistics | CORRECTED | occurrence_statistics 81/82 -> 113/113 (media_count/total_occurrences), derived from distinct CultureMech recipe ids in the #337 occurrence table. The prior values came from the importer retired in #453, whose media_count counted a list truncated to 50 examples (#449). [source=ingredient_occurrences.tsv culturemech_rev=15a4da5c08 rows=194137 distinct_recipes=15257] |