2'-amino-2'-deoxyadenosine

naturalproductmech:mibig-92f786b464 MINTED SEEDED

Grounding review: No 3-star ChEBI entry shares this structure, so the record keeps a content-hashed identifier.

What these status tags mean

Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.

Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.

Structure

Standard InChIKey	CQKMBZHLOYVGHW-QYYRPYCUSA-N
SMILES	N[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C=NC2=C1N=CN=C2N
Stereochemistry	fully defined
Cross-references	npatlas:NPA01164

Filing pathway

Carbohydrates — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is other, from MIBiG.

Producer organisms 1

A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.

Taxon	Basis	Cluster	Evidence
Actinomadura sp. ATCC 39365 NCBITaxon:1676613	SOURCE_ASSERTION	mibig:BGC0001484	DOI:10.7164/antibiotics.38.1008

Occurrences 15

Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.

Taxon	Source	Reference
Micrococcus luteus NCBITaxon:1270	LOTUS	DOI:10.1080/00021369.1985.10867155
Lysinibacillus sphaericus NCBITaxon:1421	LOTUS	DOI:10.1080/00021369.1985.10867155
Actinomadura NCBITaxon:1988	LOTUS	DOI:10.7164/ANTIBIOTICS.32.1367
Nocardioides simplex NCBITaxon:2045	LOTUS	DOI:10.1080/00021369.1985.10867155
Brevundimonas diminuta NCBITaxon:293	LOTUS	DOI:10.1080/00021369.1985.10867155
Xanthomonas campestris NCBITaxon:339	LOTUS	DOI:10.1080/00021369.1985.10867155
Citrobacter freundii NCBITaxon:546	LOTUS	DOI:10.1080/00021369.1985.10867155
Enterobacter aerogenes NCBITaxon:548	LOTUS	DOI:10.1080/00021369.1985.10867155
Pantoea agglomerans NCBITaxon:549	LOTUS	DOI:10.1080/00021369.1985.10867155
Enterobacter cloacae NCBITaxon:550	LOTUS	DOI:10.1080/00021369.1985.10867155
Escherichia coli NCBITaxon:562	LOTUS	DOI:10.1080/00021369.1985.10867155
Providencia rettgeri NCBITaxon:587	LOTUS	DOI:10.1080/00021369.1985.10867155
Serratia marcescens NCBITaxon:615	LOTUS	DOI:10.1080/00021369.1985.10867155
Aeromonas salmonicida NCBITaxon:645	LOTUS	DOI:10.1080/00021369.1985.10867155
Aeromonas caviae NCBITaxon:648	LOTUS	DOI:10.1080/00021369.1985.10867155

Biosynthetic gene clusters 1

Accession	Host	Locus evidence	Genome
mibig:BGC0001484	Actinomadura sp. ATCC 39365 NCBITaxon:1676613	CLUSTER_UNSTATED	genbank:KP025768.1

A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.

Mechanism & Biosynthesis Overview

Explore across X-Mech

AntibioticMech (2'-amino-2'-deoxyadenosine) ↗ MediaIngredientMech (naturalproductmech:mibig-92f786b464) ↗ TaxonMech: Actinomadura sp. ATCC 39365 (NCBITaxon:1676613) ↗ PathwayMech (mibig:BGC0001484) ↗

Provenance

Source concept	Source	Version
BGC0001484	MIBIG	3

This page is generated from data/natural_products/carbohydrates/2-amino-2-deoxyadenosine.yaml, which is generated from the committed inventories. Neither is edited by hand.