NaturalProductMech

Browse · Polyketides · monocillin IV

monocillin IV

naturalproductmech:mibig-436434b23f MINTED SEEDED enzyme inhibitor

Grounding review: No 3-star ChEBI entry shares this structure, so the record keeps a content-hashed identifier.
What these status tags mean

Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.

Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.

Structure

Standard InChIKeyWSBASKMWDAUNEI-OGOUPESXSA-N
SMILESC[C@@H]1C/C=C/CCCCC(=O)CC2=CC(=CC(=C2C(=O)O1)O)O
Stereochemistryfully defined
Cross-referencesnpatlas:NPA003154, pubchem:5275906

Filing pathway

Polyketides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.

Producer organisms 1

A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.

TaxonBasisClusterEvidence
Pochonia chlamydosporia 170
NCBITaxon:1380566
SOURCE_ASSERTION mibig:BGC0002187 DOI:10.1021/acs.jafc.9b01977

Occurrences 4

Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.

TaxonSourceReference
Humicola fuscoatra
NCBITaxon:112175
LOTUS DOI:10.1128/AEM.64.11.4482-4484.1998
Paecilomyces
NCBITaxon:33202
LOTUS DOI:10.1021/ACS.JNATPROD.7B00066
Monocillium nordinii
NCBITaxon:3412472
LOTUS DOI:10.1016/S0031-9422(00)81811-7
Monocillium nordinii
NCBITaxon:3412472
LOTUS DOI:10.1139/M80-133

Biosynthetic gene clusters 1

AccessionHostLocus evidenceGenome
mibig:BGC0002187 Pochonia chlamydosporia 170
NCBITaxon:1380566
CLUSTER_UNSTATED genbank:CM008060.1

A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.

Mechanism & Biosynthesis Overview

PRODUCERS & OCCURRENCE 1 producer (0 causal) 4 cited occurrences BIOSYNTHETIC LOCUS 1 gene cluster 0 curated pathway steps NATURAL PRODUCT monocillin IV naturalproductmech:mibig-436434b23f Polyketides TARGETS & BIOACTIVITY 0 molecular targets 4 bioactivities · 1 graph

Causal graph — bioactivity 2 nodes, 1 edge

Monocillin IV inhibits Saccharomyces cerevisiae HSP82.

SubjectPredicateObjectNotesEvidence
monocillin IV inhibits Saccharomyces cerevisiae ATP-dependent molecular chaperone HSP82 PubChem BioAssay AIDs 1799517 and 1799518 map this exact Standard InChIKey to active 0.5, 0.54, 3.2 and 4.0 uM IC50 measurements against Saccharomyces cerevisiae HSP82; P02829 resolves in UniProtKB to the S288c HSP82 gene product.
DOI:10.1016/j.chembiol.2006.09.015
  • reference
    DOI:10.1016/j.chembiol.2006.09.015
    evidence type
    PRIMARY_EXPERIMENT
    notes
    The source article evaluated synthetic macrolactones as Hsp90 inhibitors; BindingDB-deposited PubChem assays report active monocillin IV inhibition in fluorescence-polarization and Malachite Green assays.

Every edge carries its own citation; an uncited edge is refused by the corpus tests.

Bioactivities 4

Entries preserve source qualifiers, targets and evidence. Repeated assay names or values are not independent replications; inspect source detail for differences.

AssayResultTarget enzymeSource detail
FP Assay from Article 10.1016/j.chembiol.2006.09.015: "Inhibition of Hsp90 with synthetic macrolactones: synthesis and structural and biological evaluation of ring and conformational analogs of radicicol."IC50 0.5 uM; ACTIVEUniProtKB:P02829
PMID:17114002
assay
FP Assay from Article 10.1016/j.chembiol.2006.09.015: "Inhibition of Hsp90 with synthetic macrolactones: synthesis and structural and biological evaluation of ring and conformational analogs of radicicol."
evidence
  • reference
    PMID:17114002
    evidence type
    DATABASE_ASSERTION
    notes
    PubChem BioAssay AID 1799517, deposited by BindingDB; assay type Confirmatory.
call
ACTIVE
measurement type
IC50
value
0.5
units
uM
target enzyme
UniProtKB:P02829
activity class
ENZYME_INHIBITOR
FP Assay from Article 10.1016/j.chembiol.2006.09.015: "Inhibition of Hsp90 with synthetic macrolactones: synthesis and structural and biological evaluation of ring and conformational analogs of radicicol."IC50 0.54 uM; ACTIVEUniProtKB:P02829
PMID:17114002
assay
FP Assay from Article 10.1016/j.chembiol.2006.09.015: "Inhibition of Hsp90 with synthetic macrolactones: synthesis and structural and biological evaluation of ring and conformational analogs of radicicol."
evidence
  • reference
    PMID:17114002
    evidence type
    DATABASE_ASSERTION
    notes
    PubChem BioAssay AID 1799517, deposited by BindingDB; assay type Confirmatory.
call
ACTIVE
measurement type
IC50
value
0.54
units
uM
target enzyme
UniProtKB:P02829
activity class
ENZYME_INHIBITOR
Malachite Green Assay from Article 10.1016/j.chembiol.2006.09.015: "Inhibition of Hsp90 with synthetic macrolactones: synthesis and structural and biological evaluation of ring and conformational analogs of radicicol."IC50 3.2 uM; ACTIVEUniProtKB:P02829
PMID:17114002
assay
Malachite Green Assay from Article 10.1016/j.chembiol.2006.09.015: "Inhibition of Hsp90 with synthetic macrolactones: synthesis and structural and biological evaluation of ring and conformational analogs of radicicol."
evidence
  • reference
    PMID:17114002
    evidence type
    DATABASE_ASSERTION
    notes
    PubChem BioAssay AID 1799518, deposited by BindingDB; assay type Confirmatory.
call
ACTIVE
measurement type
IC50
value
3.2
units
uM
target enzyme
UniProtKB:P02829
activity class
ENZYME_INHIBITOR
Malachite Green Assay from Article 10.1016/j.chembiol.2006.09.015: "Inhibition of Hsp90 with synthetic macrolactones: synthesis and structural and biological evaluation of ring and conformational analogs of radicicol."IC50 4 uM; ACTIVEUniProtKB:P02829
PMID:17114002
assay
Malachite Green Assay from Article 10.1016/j.chembiol.2006.09.015: "Inhibition of Hsp90 with synthetic macrolactones: synthesis and structural and biological evaluation of ring and conformational analogs of radicicol."
evidence
  • reference
    PMID:17114002
    evidence type
    DATABASE_ASSERTION
    notes
    PubChem BioAssay AID 1799518, deposited by BindingDB; assay type Confirmatory.
call
ACTIVE
measurement type
IC50
value
4.0
units
uM
target enzyme
UniProtKB:P02829
activity class
ENZYME_INHIBITOR

Explore across X-Mech

Provenance

Source conceptSourceVersion
BGC0002187MIBIG3

This page is generated from data/natural_products/polyketides/monocillin-iv.yaml, which is generated from the committed inventories. Neither is edited by hand.