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valinomycin

naturalproductmech:mibig-ebb9d93910 MINTED SEEDED enzyme inhibitor

Grounding review: No 3-star ChEBI entry shares this structure, so the record keeps a content-hashed identifier.
What these status tags mean

Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.

Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.

Structure

Standard InChIKeyFCFNRCROJUBPLU-ZJUJSLGGSA-N
SMILESCC(C)[C@@H]1NC(=O)C(C)OC(=O)[C@H](NC(=O)[C@H](OC(=O)[C@@H](NC(=O)[C@H](C)OC(=O)[C@H](NC(=O)[C@H](OC(=O)[C@@H](NC(=O)[C@H](C)OC(=O)[C@H](NC(=O)[C@H](OC1=O)C(C)C)C(C)C)C(C)C)C(C)C)C(C)C)C(C)C)C(C)C)C(C)C
Stereochemistry undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers
Cross-referencesnpatlas:NPA06953, pubchem:3000706

Filing pathway

Unclassified — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.

Producer organisms 2

A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.

TaxonBasisClusterEvidence
Streptomyces tsusimaensis
NCBITaxon:285482
BGC_CHARACTERIZED mibig:BGC0000453 PMID:16511823
Rothia nasimurium
NCBITaxon:85336
SOURCE_ASSERTION mibig:BGC0001341 DOI:10.1128/aem.02671-10

Occurrences 25

Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.

TaxonSourceReference
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1002/ASIA.200900011
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1002/CBIC.200500425
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1007/S10295-015-1679-5
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1007/S11274-019-2704-Z
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1016/J.JBIOTEC.2017.05.008
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1038/S41429-019-0183-Y
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1094/PHYTO-11-13-0327-R
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1128/AEM.64.12.4767-4773.1998
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1128/IAI.68.1.165-169.2000
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1128/JB.172.6.3108-3116.1990
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.1371/JOURNAL.PONE.0007194
Streptomyces anulatus
NCBITaxon:1892
LOTUS DOI:10.3390/MD8020373
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1002/ASIA.200900011
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1002/CBIC.200500425
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1007/S10295-015-1679-5
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1007/S11274-019-2704-Z
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1016/J.JBIOTEC.2017.05.008
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1038/S41429-019-0183-Y
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1094/PHYTO-11-13-0327-R
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1128/AEM.64.12.4767-4773.1998
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1128/IAI.68.1.165-169.2000
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1128/JB.172.6.3108-3116.1990
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.1371/JOURNAL.PONE.0007194
Streptomyces exfoliatus
NCBITaxon:1905
LOTUS DOI:10.3390/MD8020373
Streptomyces griseus
NCBITaxon:1911
LOTUS DOI:10.1002/ASIA.200900011

Biosynthetic gene clusters 2

AccessionHostLocus evidenceGenome
mibig:BGC0000453 Streptomyces tsusimaensis
NCBITaxon:285482
CLUSTER_DEMONSTRATED genbank:DQ174261.1
mibig:BGC0001341 Rothia nasimurium
NCBITaxon:85336
CLUSTER_UNSTATED genbank:LXWF01000040.1

A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.

Mechanism & Biosynthesis Overview

PRODUCERS & OCCURRENCE 2 producers (1 causal) 25 cited occurrences BIOSYNTHETIC LOCUS 2 gene clusters 0 curated pathway steps NATURAL PRODUCT valinomycin naturalproductmech:mibig-ebb9d93910 Unclassified TARGETS & BIOACTIVITY 0 molecular targets 1 bioactivity · 0 graphs

Bioactivities 1

Entries preserve source qualifiers, targets and evidence. Repeated assay names or values are not independent replications; inspect source detail for differences.

AssayResultTarget enzymeSource detail
Luminescence cell-based high throughput primary assay to identify inhibitors of TEAD-YAP interaction.ACTIVENot recorded
pubchem.aid:1259422
assay
Luminescence cell-based high throughput primary assay to identify inhibitors of TEAD-YAP interaction.
evidence
  • reference
    pubchem.aid:1259422
    evidence type
    DATABASE_ASSERTION
    notes
    PubChem BioAssay AID 1259422, deposited by The Scripps Research Institute Molecular Screening Center; assay type Screening. Target accession NP_001123617 was left ungrounded because PubChem did not provide a UniProtKB accession.
call
ACTIVE
activity class
ENZYME_INHIBITOR

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Open questions 1

shared-structure — This structure is reported by more than one MIBiG entry: BGC0000453, BGC0001341. Confirm they describe the same compound rather than an upstream cross-reference error.

Provenance

Source conceptSourceVersion
BGC0000453MIBIG5
BGC0001341MIBIG4

This page is generated from data/natural_products/unclassified/valinomycin-2.yaml, which is generated from the committed inventories. Neither is edited by hand.