2-deoxystreptamine

CHEBI:28295 ·resolve ·ANTIBACTERIAL ·EXACT SEEDED

An amino cyclitol consisting of scyllo-inositol with the hydroxy groups at positions 1 and 3 replaced by unsubstituted amino groups and that at position 2 replaced by hydrogen. — ChEBI

Machine-generated and unreviewed. Identity, structure and cross-references come straight from ChEBI's and CARD's own data; no curator has signed off on this record yet.

Classification

Strictly broader compounds or drug classes this molecule belongs to.

CHEBI:61689 CHEBI:61689

Chemical structure

Computed structure properties
Molecular formula	C6H14N2O3
Charge	0
Average mass	162.189 Da
Monoisotopic mass	162.10044 Da
Source	ChEBI
InChIKey	DTFAJAKTSMLKAT-JDCCYXBGSA-N

SMILES

N[C@@H]1C[C@H](N)[C@@H](O)[C@H](O)[C@H]1O

InChI

InChI=1S/C6H14N2O3/c7-2-1-3(8)5(10)6(11)4(2)9/h2-6,9-11H,1,7-8H2/t2-,3+,4+,5-,6-

Also called

(1R,2r,3S,4R,6S)-4,6-diaminocyclohexane-1,2,3-triol (EXACT_SYNONYM)— chebi
2-Deoxystreptamine (EXACT_SYNONYM)— chebi
2-Desoxystreptamine (EXACT_SYNONYM)— chebi
4,6-diamino-1,2,3-cyclohexanetriol (EXACT_SYNONYM)— chebi
Deoxystreptamine (EXACT_SYNONYM)— chebi

Cross-references

Equivalent identifiers for this same structure in other resources.

cas:2037-48-1
kegg.compound:C02627
metacyc.compound:CPD-10151
pdb-ccd:CYY
reaxys:2802188

Activity roles

Every antimicrobial role a source asserts for this compound — the unreduced evidence behind its antimicrobial_class.

CHEBI:33282 CHEBI:33282

Source concepts

Every upstream concept that resolved to this record. The merge is the product: this is what shows ChEBI and CARD are describing the same structure.

Upstream concepts merged into this record
Source	Native ID	Label	Minted CURIE	Version
CHEBI	`CHEBI:28295`	2-deoxystreptamine	`antibioticmech:chebi-6b7a612fa6`	2026-08-30

Curation history

SEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Seeded from data/raw/ inventories (CHEBI)
RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Re-seeded from updated data/raw/ inventories
RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Re-seeded from updated data/raw/ inventories

Provenance

Seeded by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.