albomycin δ1

CHEBI:83206 ·resolve ·ANTIBACTERIAL ·EXACT SEEDED

An iron(III) hydroxamate in which desferrialbomycin δ1(3−) is complexed to iron(III). — ChEBI

Machine-generated and unreviewed. Identity, structure and cross-references come straight from ChEBI's and CARD's own data; no curator has signed off on this record yet.

Classification

Strictly broader compounds or drug classes this molecule belongs to.

CHEBI:84688 CHEBI:84688

Chemical structure

Computed structure properties
Molecular formula	C36H55FeN10O18S
Charge	0
Average mass	1003.8 Da
Monoisotopic mass	1003.27659 Da
Source	ChEBI
InChIKey	KKRRFZFRCNSVCL-DFBZBFILSA-N

SMILES

[H][C@]1([C@@H](O)[C@@H](NC(=O)[C@H](CO)NC(=O)[C@@H]2CCCN(C(C)=O)[O][Fe]3[O]N(C(C)=O)CCC[C@H](NC(=O)[C@@H](N)CCCN(C(C)=O)[O]3)C(=O)N2)C(=O)O)S[C@@]([H])(n2ccc(=O)n(C)c2=O)[C@H](O)[C@H]1O

InChI

InChI=1S/C36H55N10O18S.Fe/c1-17(48)44(62)12-5-8-20(37)30(55)38-21(9-6-13-45(63)18(2)49)31(56)39-22(10-7-14-46(64)19(3)50)32(57)40-23(16-47)33(58)41-25(35(59)60)26(52)29-27(53)28(54)34(65-29)43-15-11-24(51)42(4)36(43)61;/h11,15,20-23,25-29,34,47,52-54H,5-10,12-14,16,37H2,1-4H3,(H,38,55)(H,39,56)(H,40,57)(H,41,58)(H,59,60);/q-3;+3/t20-,21-,22-,23-,25+,26-,27+,28+,29+,34+;/m0./s1

Also called

iron(3+) N5-acetyl-N5-oxido-L-ornithyl-N5-acetyl-N5-oxido-L-ornithyl-N5-acetyl-N5-oxido-L-ornithyl-L-seryl-(3S)-3-[(2R,3R,4R,5R)-3,4-dihydroxy-5-(3-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrothiophen-2-yl]-D-serine (EXACT_SYNONYM)— chebi
[N5-acetyl-N5-(hydroxy-κO)-L-ornithyl-N5-acetyl-N5-(hydroxy-κO)-L-ornithyl-N5-acetyl-N5-(hydroxy-κO)-L-ornithyl-L-seryl-(3S)-3-[(2R,3R,4R,5R)-3,4-dihydroxy-5-(3-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrothiophen-2-yl]-D-serinato(3−)]iron (EXACT_SYNONYM)— chebi
albomycin delta(1) (EXACT_SYNONYM)— chebi

Cross-references

Equivalent identifiers for this same structure in other resources.

cas:1414-39-7

Activity roles

Every antimicrobial role a source asserts for this compound — the unreduced evidence behind its antimicrobial_class.

CHEBI:33281 CHEBI:33281
CHEBI:33282 CHEBI:33282

Source concepts

Every upstream concept that resolved to this record. The merge is the product: this is what shows ChEBI and CARD are describing the same structure.

Upstream concepts merged into this record
Source	Native ID	Label	Minted CURIE	Version
CHEBI	`CHEBI:83206`	albomycin δ1	`antibioticmech:chebi-011c0973d1`	2026-08-30

Curation history

SEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Seeded from data/raw/ inventories (CHEBI)
RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Re-seeded from updated data/raw/ inventories
RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Re-seeded from updated data/raw/ inventories

Provenance

Seeded by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.