albomycin δ2

CHEBI:83215 ·resolve ·ANTIBACTERIAL ·EXACT SEEDED

An iron(III) hydroxamate in which desferrialbomycin δ2(3−) is complexed to iron(III). — ChEBI

Machine-generated and unreviewed. Identity, structure and cross-references come straight from ChEBI's and CARD's own data; no curator has signed off on this record yet.

Classification

Strictly broader compounds or drug classes this molecule belongs to.

CHEBI:28163 CHEBI:28163

Chemical structure

Computed structure properties
Molecular formula	C37H57FeN12O18S
Charge	0
Average mass	1045.841 Da
Monoisotopic mass	1045.29839 Da
Source	ChEBI
InChIKey	RQZRKFJHRUDTLB-IDJYBIRTSA-N

SMILES

[H][C@]1([C@@H](O)[C@@H](NC(=O)[C@H](CO)NC(=O)[C@@H]2CCCN(C(C)=O)[O][Fe]3[O]N(C(C)=O)CCC[C@H](NC(=O)[C@@H](N)CCCN(C(C)=O)[O]3)C(=O)N2)C(=O)O)S[C@@]([H])(n2ccc(=NC(N)=O)n(C)c2=O)[C@H](O)[C@H]1O

InChI

InChI=1S/C37H57N12O18S.Fe/c1-17(51)47(65)12-5-8-20(38)30(57)40-21(9-6-13-48(66)18(2)52)31(58)41-22(10-7-14-49(67)19(3)53)32(59)42-23(16-50)33(60)44-25(35(61)62)26(54)29-27(55)28(56)34(68-29)46-15-11-24(43-36(39)63)45(4)37(46)64;/h11,15,20-23,25-29,34,50,54-56H,5-10,12-14,16,38H2,1-4H3,(H2,39,63)(H,40,57)(H,41,58)(H,42,59)(H,44,60)(H,61,62);/q-3;+3/b43-24+;/t20-,21-,22-,23-,25+,26-,27+,28+,29+,34+;/m0./s1

Also called

iron(3+) N5-acetyl-N5-oxido-L-ornithyl-N5-acetyl-N5-oxido-L-ornithyl-N5-acetyl-N5-oxido-L-ornithyl-L-seryl-(3S)-3-{(2R,3R,4R,5R)-5-[4-(carbamoylimino)-3-methyl-2-oxo-3,4-dihydropyrimidin-1(2H)-yl]-3,4-dihydroxytetrahydrothiophen-2-yl}-D-serine (EXACT_SYNONYM)— chebi
[N5-acetyl-N5-(hydroxy-κO)-L-ornithyl-N5-acetyl-N5-(hydroxy-κO)-L-ornithyl-N5-acetyl-N5-(hydroxy-κO)-L-ornithyl-L-seryl-(3S)-3-{(2R,3R,4R,5R)-5-[4-(carbamoylimino)-3-methyl-2-oxo-3,4-dihydropyrimidin-1(2H)-yl]-3,4-dihydroxytetrahydrothiophen-2-yl}-D-serinato(3−)]iron (EXACT_SYNONYM)— chebi
albomycin δ(2) (EXACT_SYNONYM)— chebi

Activity roles

Every antimicrobial role a source asserts for this compound — the unreduced evidence behind its antimicrobial_class.

CHEBI:33281 CHEBI:33281
CHEBI:33282 CHEBI:33282

Source concepts

Every upstream concept that resolved to this record. The merge is the product: this is what shows ChEBI and CARD are describing the same structure.

Upstream concepts merged into this record
Source	Native ID	Label	Minted CURIE	Version
CHEBI	`CHEBI:83215`	albomycin δ2	`antibioticmech:chebi-d15d08116d`	2026-08-30

Curation history

SEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Seeded from data/raw/ inventories (CHEBI)
RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Re-seeded from updated data/raw/ inventories
RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Re-seeded from updated data/raw/ inventories

Provenance

Seeded by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.