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cefazolin

CHEBI:474053 ·resolve ·ANTIBACTERIAL ·EXACT SEEDED

A first-generation cephalosporin compound having [(5-methyl-1,3,4-thiadiazol-2-yl)sulfanyl]methyl and (1H-tetrazol-1-ylacetyl)amino side-groups at positions 3 and 7 respectively. — ChEBI

Machine-generated and unreviewed. Identity, structure and cross-references come straight from ChEBI's and CARD's own data; no curator has signed off on this record yet.

Classification

cephalosporinARO:0000032

Strictly broader compounds or drug classes this molecule belongs to.

Chemical structure

Computed structure properties
Molecular formulaC14H14N8O4S3
Charge0
Average mass454.519 Da
Monoisotopic mass454.03001 Da
SourceChEBI
InChIKeyMLYYVTUWGNIJIB-BXKDBHETSA-N

SMILES

[H][C@]12SCC(CSc3nnc(C)s3)=C(C(=O)O)N1C(=O)[C@H]2NC(=O)Cn1cnnn1

InChI

InChI=1S/C14H14N8O4S3/c1-6-17-18-14(29-6)28-4-7-3-27-12-9(11(24)22(12)10(7)13(25)26)16-8(23)2-21-5-15-19-20-21/h5,9,12H,2-4H2,1H3,(H,16,23)(H,25,26)/t9-,12-/m1/s1

Also called

Cross-references

Identifiers for this same structure in other resources. An accession that lands on two different structures in this corpus is withheld from both rather than shown here, since it names at most one of them.

Drug registries

Identifiers that name a drug rather than a structure. One of these can cover a parent compound, its salts and its stereoisomers, which this corpus keeps as separate records, so it is not an equivalence of structure.

Patents and articles

Documents about this compound. A patent covers a class and an article covers a topic; neither identifies a structure.

Activity roles

Every antimicrobial role a source asserts for this compound — the unreduced evidence behind its antimicrobial_class.

Source concepts

Every upstream concept that resolved to this record. The merge is the product: this is what shows ChEBI and CARD are describing the same structure.

Upstream concepts merged into this record
SourceNative IDLabelMinted CURIEVersion
ARO ARO:0000058 cefazolin antibioticmech:aro-91ba49115d 2026-08-30
CHEBI CHEBI:474053 cefazolin antibioticmech:chebi-2803cda771 2026-08-30

Molecular targets

The molecular entity or process this compound acts on. Each target carries evidence — this is a mechanistic claim, not a classification.

beta-lactam sensitive penicillin-binding protein PROTEIN DIRECT_BINDING_TARGET

ARO:3000749

CARD/ARO database assertion; target organism, strain, and assay are not specified. Penicillin-binding proteins are asserted as inhibited transpeptidases. Evidence status: PRIMARY_EVIDENCE_NEEDED. Source: CARD_ARO 2026-08-30 (retrieved 2026-08-30).

Activity spectrum

Measured or curated activity against specific taxa. A number without a method is not an observation — every row here carries an assay.

7 observations · Browse all observations · Complete record (JSON.gz)

Activity observations
OrganismActivityMICDisk diffusionAssayStrainSample/genomeEvidence
Escherichia coli NCBITaxon:562 — >8.0 mg/L — Broth microdilution cefazolin MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35. 0349 BioSample SAMN11953777
Evidence Page data (JSON.gz)
Klebsiella pneumoniae NCBITaxon:573 — >8.0 mg/L — Broth microdilution cefazolin MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35. 0497 BioSample SAMN11953783
Evidence Page data (JSON.gz)
Klebsiella aerogenes NCBITaxon:548 — >8.0 mg/L — Broth microdilution cefazolin MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35. 0074 BioSample SAMN04014915
Evidence Page data (JSON.gz)
Escherichia coli NCBITaxon:562 — >8.0 mg/L — Broth microdilution cefazolin MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35. 0346 BioSample SAMN11953774
Evidence Page data (JSON.gz)
Citrobacter freundii NCBITaxon:546 — >8.0 mg/L — Broth microdilution cefazolin MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35. 0637 BioSample SAMN10055345
Evidence Page data (JSON.gz)
Escherichia coli NCBITaxon:562 — >8.0 mg/L — Broth microdilution cefazolin MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35. 0495 BioSample SAMN11953781
Evidence Page data (JSON.gz)
Escherichia coli NCBITaxon:562 — >8.0 mg/L — Broth microdilution cefazolin MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35 per the CDC/FDA AR Isolate Bank Panel 10 footnote. 0538 BioSample SAMN11953785
Evidence Page data (JSON.gz)

Resistance mechanisms

13 source-backed resistance determinants or associations, with ARO grounding where reported. Grouped by reported mechanism type.

ANTIBIOTIC_INACTIVATION 12
ANTIBIOTIC_INACTIVATION
DeterminantARO IDOrganismGene familiesEvidence
CAE-1 ARO:3007635 not organism-specific —
  • ARO:3007635 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
CMY-2 ARO:3002013 not organism-specific —
  • ARO:3002013 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
CTX-M-15 ARO:3001878 not organism-specific —
  • ARO:3001878 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
CTX-M-27 ARO:3001889 not organism-specific —
  • ARO:3001889 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
CTX-M-3 ARO:3001866 not organism-specific —
  • ARO:3001866 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
LAQ-1 ARO:3007438 not organism-specific —
  • ARO:3007438 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
NmcA ARO:3003589 not organism-specific —
  • ARO:3003589 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
PDC-3 ARO:3002500 not organism-specific —
  • ARO:3002500 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
PDC-5 ARO:3002502 not organism-specific —
  • ARO:3002502 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
PRC-1 ARO:3007085 not organism-specific —
  • ARO:3007085 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
PSZ-1 ARO:3007648 not organism-specific —
  • ARO:3007648 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
TEM-1 ARO:3000873 not organism-specific —
  • ARO:3000873 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)
REDUCED_PERMEABILITY 1
REDUCED_PERMEABILITY
DeterminantARO IDOrganismGene familiesEvidence
porin OmpC ARO:3004114 not organism-specific —
  • ARO:3004114 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000058 (cefazolin); database assertion, not a primary citation.)

Curation history

  1. SEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources

    Seeded from data/raw/ inventories (ARO, CHEBI)

  2. RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources

    Re-seeded from updated data/raw/ inventories

  3. RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources

    Re-seeded from updated data/raw/ inventories

  4. RESEEDED_FROM_SOURCES 2026-08-31 · seed_from_sources

    Re-seeded from updated data/raw/ inventories

  5. RESEEDED_FROM_SOURCES 2026-09-10 · seed_from_sources

    Re-seeded from updated data/raw/ inventories

  6. CURATED_RESISTANT_TAXA 2026-09-12 · codex · LLM-assisted

    Added one stable-URL CDC/FDA AR Isolate Bank cefazolin-resistant Escherichia coli isolate MIC observation.

  7. CURATED_RESISTANT_TAXA 2026-09-12 · codex · LLM-assisted

    Added one stable-URL CDC/FDA AR Isolate Bank cefazolin-resistant Klebsiella pneumoniae isolate MIC observation.

  8. CURATED_RESISTANT_TAXA 2026-09-12 · codex · LLM-assisted

    Added one stable-URL CDC/FDA AR Isolate Bank cefazolin-resistant Klebsiella aerogenes isolate MIC observation.

  9. CURATED_RESISTANT_TAXA 2026-09-12 · codex · LLM-assisted

    Corrected the CDC/FDA AR Isolate Bank 0349 breakpoint context from CLSI 2024 M100 S34 to CLSI 2025 M100 S35.

  10. CURATED_RESISTANT_TAXA 2026-09-12 · codex · LLM-assisted

    Fixes #286. Corrected the CDC/FDA AR Isolate Bank 0074 breakpoint context from CLSI 2024 M100 S34 to CLSI 2025 M100 S35.

  11. CURATED_RESISTANT_TAXA 2026-09-12 · codex · LLM-assisted

    Added one stable-URL CDC/FDA AR Isolate Bank cefazolin-resistant Escherichia coli MIC observation from isolate 0346.

  12. CURATED_RESISTANT_TAXA 2026-09-13 · codex · LLM-assisted

    Added one stable-URL CDC/FDA AR Isolate Bank Panel 10 cefazolin-resistant Citrobacter freundii MIC observation for AR-0637.

  13. CURATED_RESISTANT_TAXA 2026-09-17 · codex · LLM-assisted

    Added one stable-URL CDC/FDA AR Isolate Bank Panel 10 cefazolin-resistant Escherichia coli MIC observation for AR-0495.

  14. CURATED_RESISTANT_TAXA 2026-09-19 · codex · LLM-assisted

    Added one stable-URL CDC/FDA AR Isolate Bank Panel 10 cefazolin-resistant Escherichia coli MIC observation for AR-0538; preserved BioSample SAMN11953785 and Study ID NEW-22 in evidence notes.

  15. STRUCTURED_ACTIVITY_BIOSAMPLE_ACCESSIONS 2026-09-26 · codex · LLM-assisted

    Structured BioSample accessions on 7 activity_spectrum observation(s) where evidence notes already named exactly one accession.

Provenance

Seeded by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record (YAML).

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