AntibioticMech

Browse · ANTIBACTERIAL

ertapenem

CHEBI:404903 ·resolve ·ANTIBACTERIAL ·EXACT SEEDED

Meropenem in which the one of the two methyl groups attached to the amide nitrogen is replaced by hydrogen while the other is replaced by a 3-carboxyphenyl group. The sodium salt is used for the treatment of moderate to severe susceptible infections including intra-abdominal and acute gynaecological infections, pneumonia, and infections of the skin and of the urinary tract. — ChEBI

Machine-generated and unreviewed. Identity, structure and cross-references come straight from ChEBI's and CARD's own data; no curator has signed off on this record yet.

Classification

carbapenemARO:0000020

Strictly broader compounds or drug classes this molecule belongs to.

Chemical structure

Computed structure properties
Molecular formulaC22H25N3O7S
Charge0
Average mass475.523 Da
Monoisotopic mass475.14132 Da
SourceChEBI
InChIKeyJUZNIMUFDBIJCM-ANEDZVCMSA-N

SMILES

[H][C@@]1(SC2=C(C(=O)O)N3C(=O)[C@]([H])([C@@H](C)O)[C@@]3([H])[C@H]2C)CN[C@]([H])(C(=O)Nc2cccc(C(=O)O)c2)C1

InChI

InChI=1S/C22H25N3O7S/c1-9-16-15(10(2)26)20(28)25(16)17(22(31)32)18(9)33-13-7-14(23-8-13)19(27)24-12-5-3-4-11(6-12)21(29)30/h3-6,9-10,13-16,23,26H,7-8H2,1-2H3,(H,24,27)(H,29,30)(H,31,32)/t9-,10-,13+,14+,15-,16-/m1/s1

Also called

Cross-references

Identifiers for this same structure in other resources. An accession that lands on two different structures in this corpus is withheld from both rather than shown here, since it names at most one of them.

Drug registries

Identifiers that name a drug rather than a structure. One of these can cover a parent compound, its salts and its stereoisomers, which this corpus keeps as separate records, so it is not an equivalence of structure.

Patents and articles

Documents about this compound. A patent covers a class and an article covers a topic; neither identifies a structure.

Activity roles

Every antimicrobial role a source asserts for this compound — the unreduced evidence behind its antimicrobial_class.

Source concepts

Every upstream concept that resolved to this record. The merge is the product: this is what shows ChEBI and CARD are describing the same structure.

Upstream concepts merged into this record
SourceNative IDLabelMinted CURIEVersion
ARO ARO:0000070 ertapenem antibioticmech:aro-ac23aaf931 2026-08-30
CHEBI CHEBI:404903 ertapenem antibioticmech:chebi-f4e1cf82ea 2026-08-30

Molecular targets

The molecular entity or process this compound acts on. Each target carries evidence — this is a mechanistic claim, not a classification.

beta-lactam sensitive penicillin-binding protein PROTEIN DIRECT_BINDING_TARGET

ARO:3000749

CARD/ARO database assertion; target organism, strain, and assay are not specified. Penicillin-binding proteins are asserted as inhibited transpeptidases. Evidence status: PRIMARY_EVIDENCE_NEEDED. Source: CARD_ARO 2026-08-30 (retrieved 2026-08-30).

Activity spectrum

Measured or curated activity against specific taxa. A number without a method is not an observation — every row here carries an assay.

4 observations · Browse all observations · Complete record (JSON.gz)

Activity observations
OrganismActivityMICDisk diffusionAssayStrainSample/genomeEvidence
Escherichia coli NCBITaxon:562 — >8.0 mg/L — Broth microdilution ertapenem MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35. 1305 BioSample SAMN46941623
Evidence Page data (JSON.gz)
Klebsiella pneumoniae NCBITaxon:573 — >8.0 mg/L — Broth microdilution ertapenem MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35. 0347 BioSample SAMN11953775
Evidence Page data (JSON.gz)
Escherichia coli NCBITaxon:562 — >8.0 mg/L — Broth microdilution ertapenem MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35. 0348 BioSample SAMN11953776
Evidence Page data (JSON.gz)
Klebsiella aerogenes NCBITaxon:548 — 2.0 mg/L — Broth microdilution ertapenem MIC; modal MIC reported; interpreted using CLSI 2025 M100 S35 per the CDC/FDA AR Isolate Bank Panel 1168 footnote. 0074 BioSample SAMN04014915
Evidence Page data (JSON.gz)

Resistance mechanisms

9 source-backed resistance determinants or associations, with ARO grounding where reported. Grouped by reported mechanism type.

ANTIBIOTIC_INACTIVATION 7
ANTIBIOTIC_INACTIVATION
DeterminantARO IDOrganismGene familiesEvidence
CMY-2 ARO:3002013 not organism-specific —
  • ARO:3002013 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000070 (ertapenem); database assertion, not a primary citation.)
CTX-M-27 ARO:3001889 not organism-specific —
  • ARO:3001889 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000070 (ertapenem); database assertion, not a primary citation.)
FRI-11 ARO:3007632 not organism-specific —
  • ARO:3007632 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000070 (ertapenem); database assertion, not a primary citation.)
NDM-1 ARO:3000589 not organism-specific —
  • ARO:3000589 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000070 (ertapenem); database assertion, not a primary citation.)
NDM-5 ARO:3000467 not organism-specific —
  • ARO:3000467 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000070 (ertapenem); database assertion, not a primary citation.)
VCC-1 ARO:3003713 not organism-specific —
  • ARO:3003713 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000070 (ertapenem); database assertion, not a primary citation.)
VIM-63 ARO:3005511 not organism-specific —
  • ARO:3005511 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000070 (ertapenem); database assertion, not a primary citation.)
ANTIBIOTIC_EFFLUX 1
ANTIBIOTIC_EFFLUX
DeterminantARO IDOrganismGene familiesEvidence
Klebsiella pneumoniae KpnGH-TolC ARO:3004598 not organism-specific —
  • ARO:3004598 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000070 (ertapenem); database assertion, not a primary citation.)
REDUCED_PERMEABILITY 1
REDUCED_PERMEABILITY
DeterminantARO IDOrganismGene familiesEvidence
Klebsiella pneumoniae OmpK35 ARO:3003966 not organism-specific —
  • ARO:3003966 (CARD/ARO asserts confers_resistance_to_antibiotic ARO:0000070 (ertapenem); database assertion, not a primary citation.)

Curation history

  1. SEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources

    Seeded from data/raw/ inventories (ARO, CHEBI)

  2. RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources

    Re-seeded from updated data/raw/ inventories

  3. RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources

    Re-seeded from updated data/raw/ inventories

  4. RESEEDED_FROM_SOURCES 2026-08-31 · seed_from_sources

    Re-seeded from updated data/raw/ inventories

  5. RESEEDED_FROM_SOURCES 2026-09-10 · seed_from_sources

    Re-seeded from updated data/raw/ inventories

  6. CURATED_RESISTANT_TAXA 2026-09-12 · codex · LLM-assisted

    Added one stable-URL CDC/FDA AR Isolate Bank ertapenem-resistant Escherichia coli isolate MIC observation for AR-1305.

  7. CURATED_RESISTANT_TAXA 2026-09-13 · codex · LLM-assisted

    Added two stable-URL CDC/FDA AR Isolate Bank Panel 10 ertapenem-resistant Klebsiella pneumoniae and Escherichia coli MIC observations for AR-0347 and AR-0348.

  8. CURATED_RESISTANT_TAXA 2026-09-18 · codex · LLM-assisted

    Added one stable-URL CDC/FDA AR Isolate Bank Panel 1168 ertapenem-resistant Klebsiella aerogenes MIC observation for AR-0074; preserved source Fluid Peritoneal, BioSample SAMN04014915, and Study ID CarbaNP-43 in evidence notes.

  9. STRUCTURED_ACTIVITY_BIOSAMPLE_ACCESSIONS 2026-09-26 · codex · LLM-assisted

    Structured BioSample accessions on 4 activity_spectrum observation(s) where evidence notes already named exactly one accession.

Provenance

Seeded by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record (YAML).

Explore across X-Mech: MediaIngredientMech (ertapenem) · CultureMech · NaturalProductMech · PathwayMech · TraitMech