AntibioticMech

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GRL-0617

CHEBI:167176 ·resolve ·ANTIVIRAL ·EXACT REVIEWED

A benzamide resulting from the formal condensation of the carboxy group of 5-amino-2-methylbenzoic acid with the amino group of (1R)-1-(naphthalen-1-yl)ethan-1-amine. It is a potent noncovalent inhibitor (IC50 = 600 nM) of severe acute respiratory syndrome-coronavirus papain-like protease (SARS-CoV PLpro). — ChEBI

Classification

Strictly broader compounds or drug classes this molecule belongs to.

Chemical structure

Computed structure properties
Molecular formulaC20H20N2O
Charge0
Average mass304.393 Da
Monoisotopic mass304.15756 Da
SourceChEBI
InChIKeyUVERBUNNCOKGNZ-CQSZACIVSA-N

SMILES

Cc1ccc(N)cc1C(=O)N[C@H](C)c1cccc2ccccc12

InChI

InChI=1S/C20H20N2O/c1-13-10-11-16(21)12-19(13)20(23)22-14(2)17-9-5-7-15-6-3-4-8-18(15)17/h3-12,14H,21H2,1-2H3,(H,22,23)/t14-/m1/s1

Also called

Cross-references

Identifiers for this same structure in other resources. An accession that lands on two different structures in this corpus is withheld from both rather than shown here, since it names at most one of them.

Activity roles

Every antimicrobial role a source asserts for this compound — the unreduced evidence behind its antimicrobial_class.

Source concepts

Every upstream concept that resolved to this record. The merge is the product: this is what shows ChEBI and CARD are describing the same structure.

Upstream concepts merged into this record
SourceNative IDLabelMinted CURIEVersion
CHEBI CHEBI:167176 GRL-0617 antibioticmech:chebi-c97057ae5c 2026-08-30

Molecular targets

The molecular entity or process this compound acts on. Each target carries evidence — this is a mechanistic claim, not a classification.

SARS-CoV-2 papain-like protease (PLpro) VIRAL_PROTEIN DIRECT_BINDING_TARGET

A 2.6-angstrom GRL-0617-PLpro cocrystal localized the inhibitor in the S3-S4 substrate pockets; biochemical and infected-cell assays measured protease and antiviral effects. Evidence status: PRIMARY_EVIDENCE. Source: PRIMARY_LITERATURE 2020-07; 2020-09 (retrieved 2026-09-02).

Severe acute respiratory syndrome coronavirus 2 NCBITaxon:2697049

Organism-specific examples
ProteinGeneOrganismEntry
Replicase polyprotein 1ab UniProtKB:P0DTD1
SARS-CoV-2 replicase polyprotein 1ab encoding the nsp3 papain-like protease (PLpro) domain crystallized in complex with GRL-0617 (PMID:32895623, PDB 7CJM).
rep Severe acute respiratory syndrome coronavirus 2 NCBITaxon:2697049 REVIEWED

Mechanism summary

Mode of action
VIRAL_PROTEASE_INHIBITION microbial target — CURATOR: PMID:32895623 determined a SARS-CoV-2 papain-like protease complex with GRL-0617 and measured protease inhibition. The inhibitor occupies the S3-S4 pockets and closes the BL2 loop over the substrate cleft. PMID:32726803 further linked PLpro inhibition to reduced viral replication and preserved host antiviral signaling in infected cells.

Record-level evidence

Curation history

  1. SEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources

    Seeded from data/raw/ inventories (CHEBI)

  2. RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources

    Re-seeded from updated data/raw/ inventories

  3. RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources

    Re-seeded from updated data/raw/ inventories

  4. REVIEWED 2026-09-02 · codex · LLM-assisted

    Verified exact ChEBI identity, structure, antiviral role, and class; added viral-protease inhibition, the directly bound SARS-CoV-2 PLpro target, and infected-cell antiviral context.

  5. CURATED_UNIPROT_PROTEIN_EXAMPLES 2026-10-18 · antigravity · LLM-assisted

    Added curated SARS-CoV-2 replicase polyprotein 1ab (P0DTD1) UniProtKB protein example on the PRIMARY_LITERATURE SARS-CoV-2 papain-like protease (PLpro) molecular target.

Provenance

Seeded by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record (YAML).

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