3''-deamino-3''-hydroxykanamycin X
CHEBI:72992
·resolve ·ANTIMICROBIAL_UNSPECIFIED
·EXACT
SEEDED
A kanamycin that is kanamycin X in which the 3''-amino group has been replaced by a hydroxy group. — ChEBI
Machine-generated and unreviewed. Identity, structure and
cross-references come straight from ChEBI's and CARD's own data; no curator has
signed off on this record yet.
Classification
Strictly broader compounds or drug classes this molecule belongs to.
Chemical structure
Computed structure properties
| Molecular formula | C18H34N2O13 |
|---|
| Charge | 0 |
|---|
| Average mass | 486.471 Da |
|---|
| Monoisotopic mass | 486.20609 Da |
|---|
| Source | ChEBI |
|---|
| InChIKey | LSQKHXZMWRRDRU-GUKOCFKPSA-N |
|---|
SMILES
N[C@@H]1C[C@H](N)[C@@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O
InChI
InChI=1S/C18H34N2O13/c19-4-1-5(20)16(33-18-13(28)11(26)9(24)7(3-22)31-18)14(29)15(4)32-17-12(27)10(25)8(23)6(2-21)30-17/h4-18,21-29H,1-3,19-20H2/t4-,5+,6-,7-,8-,9-,10+,11+,12-,13-,14-,15+,16-,17-,18-/m1/s1
Also called
- (1R,2S,3S,4R,6S)-4,6-diamino-3-(α-D-glucopyranosyloxy)-2-hydroxycyclohexyl α-D-glucopyranoside (EXACT_SYNONYM)— chebi
Cross-references
Equivalent identifiers for this same structure in other resources.
- chemspider:26286796
- patent:US9133492
Activity roles
Every antimicrobial role a source asserts for this compound — the
unreduced evidence behind its antimicrobial_class.
Source concepts
Every upstream concept that resolved to this record. The merge is
the product: this is what shows ChEBI and CARD are describing the same structure.
Upstream concepts merged into this record
| Source | Native ID | Label | Minted CURIE | Version |
|---|
| CHEBI |
CHEBI:72992 |
3''-deamino-3''-hydroxykanamycin X |
antibioticmech:chebi-77d0cc975d |
2026-08-30 |
Curation history
-
SEEDED_FROM_SOURCES
2026-08-30 · seed_from_sources
Seeded from data/raw/ inventories (CHEBI)
-
RESEEDED_FROM_SOURCES
2026-08-30 · seed_from_sources
Re-seeded from updated data/raw/ inventories
-
RESEEDED_FROM_SOURCES
2026-08-30 · seed_from_sources
Re-seeded from updated data/raw/ inventories
Provenance
Seeded by scripts/seed_from_sources.py from the committed
inventories in data/raw/.
View the record.