sibiromycin

CHEBI:90941 ·resolve ·ANTIMICROBIAL_UNSPECIFIED ·EXACT SEEDED

An aminoglycoside antibiotic produced by Streptosporangium sibiricum that also exhibits antitumour properties. — ChEBI

Machine-generated and unreviewed. Identity, structure and cross-references come straight from ChEBI's and CARD's own data; no curator has signed off on this record yet.

Classification

Strictly broader compounds or drug classes this molecule belongs to.

CHEBI:131437 CHEBI:131437
CHEBI:22507 CHEBI:22507
CHEBI:33853 CHEBI:33853
CHEBI:73080 CHEBI:73080

Chemical structure

Computed structure properties
Molecular formula	C24H33N3O7
Charge	0
Average mass	475.542 Da
Monoisotopic mass	475.23185 Da
Source	ChEBI
InChIKey	RAGFPHFDFVNLCG-INYQBOQCSA-N

SMILES

[H][C@@]12CC(/C=C/C)=CN1C(=O)c1cc(O[C@@H]3O[C@@H](C)[C@H](NC)[C@@](C)(O)[C@H]3O)c(C)c(O)c1N[C@@H]2O

InChI

InChI=1S/C24H33N3O7/c1-6-7-13-8-15-21(30)26-17-14(22(31)27(15)10-13)9-16(11(2)18(17)28)34-23-20(29)24(4,32)19(25-5)12(3)33-23/h6-7,9-10,12,15,19-21,23,25-26,28-30,32H,8H2,1-5H3/b7-6+/t12-,15-,19-,20-,21+,23-,24+/m0/s1

Also called

(11R,11aS)-9,11-dihydroxy-8-methyl-5-oxo-2-[(1E)-prop-1-en-1-yl]-5,10,11,11a-tetrahydro-1H-pyrrolo[2,1-][1,4]benzodiazepin-7-yl 4,6-dideoxy-3-C-methyl-4-(methylamino)-α-L-mannopyranoside (EXACT_SYNONYM)— chebi
Sybiromycin (EXACT_SYNONYM)— chebi

Cross-references

Equivalent identifiers for this same structure in other resources.

cas:12684-33-2
knapsack:C00018852
metacyc.compound:CPD-18442
reaxys:14751112

Activity roles

Every antimicrobial role a source asserts for this compound — the unreduced evidence behind its antimicrobial_class.

CHEBI:33281 CHEBI:33281

Source concepts

Every upstream concept that resolved to this record. The merge is the product: this is what shows ChEBI and CARD are describing the same structure.

Upstream concepts merged into this record
Source	Native ID	Label	Minted CURIE	Version
CHEBI	`CHEBI:90941`	sibiromycin	`antibioticmech:chebi-bc5cff9398`	2026-08-30

Curation history

SEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Seeded from data/raw/ inventories (CHEBI)
RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Re-seeded from updated data/raw/ inventories
RESEEDED_FROM_SOURCES 2026-08-30 · seed_from_sources
Re-seeded from updated data/raw/ inventories

Provenance

Seeded by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.