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Arabidopsis Phyllosphere SynCom7

Community ID CommunityMech:000093
Ecological State ENGINEERED
Environment phyllosphere
ENVO:01001442

A seven-strain reduced-complexity Arabidopsis phyllosphere SynCom used to test host genetic effects on microbiota composition.

Taxonomy

Taxon Ontology ID Functional Roles Abundance
Arabidopsis phyllosphere bacteria NCBITaxon:2
CROSS_FEEDER
N/A
  • PMID:24743269 - SUPPORT (IN_VITRO)
    "the model plant Arabidopsis thaliana was used in a gnotobiotic system and inoculated with a reduced complexity synthetic bacterial community composed of seven strains representing the most abundant phyla in the phyllosphere."

Ecological Interactions

Ecological interaction network for Arabidopsis Phyllosphere SynCom7 Bipartite graph where circle nodes represent taxa and colored rectangles represent ecological interactions (cross-feeding, mutualism, syntrophy, competition, commensalism).
Taxon
Cross-feeding
Mutualism
Syntrophy
Competition
Commensalism
Niche partitioning
Colonization facilitation
Strain competition
Predation

Host-Genotype-Structured Assembly

NICHE_PARTITIONING

Evidence

  • PMID:24743269 - SUPPORT (IN_VITRO)
    "the model plant Arabidopsis thaliana was used in a gnotobiotic system and inoculated with a reduced complexity synthetic bacterial community composed of seven strains representing the most abundant phyla in the phyllosphere."

Environmental Factors

Factor Value Unit
defined synthetic community design Seven bacterial strains representing abundant phyllosphere phyla were inoculated onto gnotobiotic Arabidopsis mutants. N/A
  • PMID:24743269 - SUPPORT (IN_VITRO)
    "the model plant Arabidopsis thaliana was used in a gnotobiotic system and inoculated with a reduced complexity synthetic bacterial community composed of seven strains representing the most abundant phyla in the phyllosphere."