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Miscanthus REE Tailings Nitrogen SynCom10

Community ID CommunityMech:000111
Ecological State ENGINEERED
Environment contaminated soil
ENVO:00002874

A ten-strain Miscanthus root-derived SynCom with nitrification and denitrification capabilities for ammonia nitrogen removal in rare earth mine tailings.

Taxonomy

Taxon Ontology ID Functional Roles Abundance
Burkholderia sp. NCBITaxon:32008
CROSS_FEEDER
N/A
  • PMID:39481489 - SUPPORT (IN_VITRO)
    "This SynCom, consisting of 10 bacterial strains, included species of the genera Burkholderia (5) Paraburkholderia (1), Curtobacterium (1), Leifsonia (1) and Sinomonas (2)."
Paraburkholderia sp. NCBITaxon:1822464
CROSS_FEEDER
N/A
  • PMID:39481489 - SUPPORT (IN_VITRO)
    "This SynCom, consisting of 10 bacterial strains, included species of the genera Burkholderia (5) Paraburkholderia (1), Curtobacterium (1), Leifsonia (1) and Sinomonas (2)."
Curtobacterium sp. NCBITaxon:2034
CROSS_FEEDER
N/A
  • PMID:39481489 - SUPPORT (IN_VITRO)
    "This SynCom, consisting of 10 bacterial strains, included species of the genera Burkholderia (5) Paraburkholderia (1), Curtobacterium (1), Leifsonia (1) and Sinomonas (2)."
Leifsonia sp. NCBITaxon:2025
CROSS_FEEDER
N/A
  • PMID:39481489 - SUPPORT (IN_VITRO)
    "This SynCom, consisting of 10 bacterial strains, included species of the genera Burkholderia (5) Paraburkholderia (1), Curtobacterium (1), Leifsonia (1) and Sinomonas (2)."
Sinomonas sp. NCBITaxon:37927
CROSS_FEEDER
N/A
  • PMID:39481489 - SUPPORT (IN_VITRO)
    "This SynCom, consisting of 10 bacterial strains, included species of the genera Burkholderia (5) Paraburkholderia (1), Curtobacterium (1), Leifsonia (1) and Sinomonas (2)."

Ecological Interactions

Ecological interaction network for Miscanthus REE Tailings Nitrogen SynCom10 Bipartite graph where circle nodes represent taxa and colored rectangles represent ecological interactions (cross-feeding, mutualism, syntrophy, competition, commensalism).
Taxon
Cross-feeding
Mutualism
Syntrophy
Competition
Commensalism
Niche partitioning
Colonization facilitation
Strain competition
Predation

Nitrogen Transformation in REE Tailings

MUTUALISM

Evidence

  • PMID:39481489 - SUPPORT (IN_VITRO)
    "This SynCom, consisting of 10 bacterial strains, included species of the genera Burkholderia (5) Paraburkholderia (1), Curtobacterium (1), Leifsonia (1) and Sinomonas (2)."

Environmental Factors

Factor Value Unit
defined synthetic community design Ten bacterial strains from Miscanthus floridulus roots representing Burkholderia, Paraburkholderia, Curtobacterium, Leifsonia, and Sinomonas. N/A
  • PMID:39481489 - SUPPORT (IN_VITRO)
    "This SynCom, consisting of 10 bacterial strains, included species of the genera Burkholderia (5) Paraburkholderia (1), Curtobacterium (1), Leifsonia (1) and Sinomonas (2)."